Pseudomonas avellanae: BKM03_23310
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Entry
BKM03_23310 CDS
T05369
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pavl
Pseudomonas avellanae
Pathway
pavl01501
beta-Lactam resistance
pavl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BKM03_23310
01503 Cationic antimicrobial peptide (CAMP) resistance
BKM03_23310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pavl03036
]
BKM03_23310
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pavl02000
]
BKM03_23310
01504 Antimicrobial resistance genes [BR:
pavl01504
]
BKM03_23310
Chromosome and associated proteins [BR:
pavl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
BKM03_23310
Transporters [BR:
pavl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BKM03_23310
Antimicrobial resistance genes [BR:
pavl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BKM03_23310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AVB21797
UniProt:
A0AAD0E0R8
LinkDB
All DBs
Position
4861406..4862566
Genome browser
AA seq
386 aa
AA seq
DB search
MQFKPAVTVLVTAVALATLLSGCSKKEQAAPPAQTPQVGVVTLKAQPYTLTTELPGRTTA
FRVAEVRPQVNGIILKRLFTEGGDVKAGQQLYQIDPAIYEANANSAKATLQSAKSMSDRY
KQLVNEQAVSRQEYDTALASTQEAQAALQTSQINLRFTKVLAPISGRIGRSAVTEGALVS
SAQADAMATIQQLDPIYVDVVQSSADMLKLRNDLDSGKLQKSGDNAAKVKLTLEDNSVYA
QEGKLEFSEVSVDQTTGSVTLRAVFPNPEHRLLPGMFVHAQLQAGVNAKAILAPQQGVTR
DLKGTPTAMIVNQDNKVELRTLVANRTVGSDWLIEDGLKEGDRVITEGLQYVKPGAEVKA
AEATNVKGANPAPAPATEKAAGSKGE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcaagccagctgttaccgttctggtcactgccgtcgccctggcaaccctgctc
agtggctgtagcaagaaggaacaggcggccccgcctgcgcaaacccctcaggtaggagtc
gttaccctcaaagcacagccctacaccctgaccaccgagcttccgggcaggacgaccgct
ttccgtgtggccgaggtccgccctcaggtcaacggcatcattctcaagcgtctgttcacc
gaaggtggcgacgtcaaggccggtcagcagctgtatcagatcgatccggctatctatgaa
gccaacgccaacagtgccaaggcgaccctgcagtccgccaagtcgatgtctgatcgctac
aagcaactggtcaacgagcaggcggtgagtcgtcaggagtacgacaccgccctggcatcg
actcaggaagcacaggcagcgctgcagacttcgcagatcaacctgcgcttcaccaaggtg
ctggcgccgatttccggccgcatcggtcgctctgcggtgaccgaaggtgcgctggtcagc
agtgcccaggcagacgcaatggcaaccattcagcagcttgatccgatctacgtggacgtg
gtccagtcttccgcagacatgctcaagctgcgcaatgacctggacagcggcaaactgcag
aagtcaggcgacaacgccgccaaggtcaagctgaccctggaagacaacagcgtttacgct
caggaaggcaaactggaattctccgaagtgtcggttgaccagaccaccggctccgtcacc
ctgcgcgcagtcttcccgaaccctgaacaccgcttgctgccaggcatgttcgttcacgcg
caattgcaggcaggcgtcaatgcaaaagccattctggcaccgcaacagggcgtgacccgc
gacttgaaaggcacgccgaccgccatgattgtcaatcaggacaacaaggttgaattgcgc
acactggtcgccaaccgcaccgtgggcagcgactggctgatcgaggacggcctgaaagaa
ggcgatcgcgtgatcaccgaaggtctgcaatacgtcaaaccaggcgcagaagtgaaagct
gccgaagcgaccaacgtcaaaggagcaaacccggcacctgccccggccactgaaaaagcc
gcaggcagcaaaggggagtaa
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