Cutibacterium acnes 266: PAZ_c13890
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Entry
PAZ_c13890 CDS
T01971
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
paw
Cutibacterium acnes 266
Pathway
paw00220
Arginine biosynthesis
paw00250
Alanine, aspartate and glutamate metabolism
paw00430
Taurine and hypotaurine metabolism
paw00910
Nitrogen metabolism
paw01100
Metabolic pathways
paw01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
paw00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
PAZ_c13890 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PAZ_c13890 (gdhB)
00220 Arginine biosynthesis
PAZ_c13890 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
PAZ_c13890 (gdhB)
Enzymes [BR:
paw01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
PAZ_c13890 (gdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_HM3
GDH_ACT3
GDH_ACT2
GDH_HM1
GDH_ACT1
Gemin7
Motif
Other DBs
NCBI-ProteinID:
AEE72556
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All DBs
Position
complement(1422098..1426717)
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AA seq
1539 aa
AA seq
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MSEMDEVIPALVAAVQEQHATGDHYRDDAIRQAMEHQAQLALRPGPVRVDVIVDPPWSDG
QINSVQVVTGDRPFLVDTVASCLLRHGWRVEDVRHPIIGVKRDRGTIEAVGMPGRGGCAS
ESWIHIDATAPLGTDIGQAAEQLRDDLCACLDQVVCATDDWGAMHEAMLRTAELVSASSG
PADDRDSSRELLEWLADDHFMYLSYQEFTVDGETMTPVAGTHLGIAEEGQRFDAVPHNDD
KATVIVTKDSVRSAVQRNGYRDYIGVRIRDEHGAVVAEHRFLGLLGSAAYTESVAHIPVL
RAKASRILALSGYRANSHSGKAVVRTIAEFPRDDFFEASAEELVPLIMAVVDLREKQRLR
ALVRRGPWGRFFHLLVFVPADRFDASTVGVVEGIVAKRTGAVEVDSTTMMGESSLVRITV
TAKVADGQVLPPIDDEKLQAELADATSNWDDEFITLASGIPSNRRGVDFGPEYKQEFTAK
QGILDLELLNGLAEDDLGLVMYRPDDPADPSDLRLKIFNQRAPMTLSQVMPHLSSLGVQI
IDEHPHRIILRGREVWLFDLGLQTPGELWKVAGRRRFTEAFAASWKGECESDTFSGLVTE
AGLSWSQVAMLRCIARYLRQLGSPFSQTYMARALRANPNLARDLVGIVEAKFDPTAFDDG
VDAGPQRLAKVEELSESFLTDLEEVASLDHDRILRMMHAVIRAMIRTNWWQSGRRALAFK
VRPTDLGFAPAPRPKFEIFVNSPRVSGTHLRFGAVARGGLRWSDRPEDFRTEVLGLVKAQ
MVKNSVIVPAGAKGGFVPAHLPDSTTNRAEWAAEGKECYRIFVSSLLSLTDNVVEGKVVA
PEDVVRHDGDDPYLVVAADKGTATFSDTANAIAAEHHFWLGDAFASGGSHGYDHKAMGIT
ARGAWESVTRHLADLGIDQATEDFTCVGIGDMSGDVFGNGMLLSRHIKLVAAFNHRHVFV
DPNPDPEASWQERRRLFNLPRSSWGDYDSSLISEGGGVWDRTLKSIPVSPHMHEALGIDA
SVNRMTPDDLISAILRAPVDLLWNGGIGTYVRATSETDAQVGDRANDPVRVTAKDVRAKA
AGEGGNLGWTQAGRIEYARNGGRINTDFIDNSAGVDTSDHEVNIKILLDAEVAAGRISEQ
ERDELLPAMADDVASLVLRHNHSQNLALANALSSDGPTAGVLEAWMCELEESGHLDRAVD
TMPSTTEMNRRMAAGERLASPELCTLLAWTKIALCDAVLATDLPEDPFVADRLVGYFPPL
LRERFTERMPTHRLHREIITTEAVNRFVDSQGITAYYRLHLQTGADIAQVIRCQLAARSV
FGLGRVETDLTHLGLDAVRTAKIRLALTDLAMHATRWFLNHGGADDIAGTIETYRPGVAT
LVEKLSERLLGDSADAWQEKVDEVTELGLDRSDAAVVAAYDWSPVLLSIVEISEEGHPLD
EVADAYLTLARRVDMIRLTRLVEQLPQDRPTDARVRASLREDLLRVMSDATRRAVVIGTD
NVLADGGRIVKSIAANPDLAHCVVMVSDLRSAVGQEVTL
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagagatggatgaagtcatcccggctctcgtggcagctgtgcaagagcagcatgcc
accggagatcattaccgtgacgatgcgattcgtcaagcgatggaacaccaggcgcagctt
gcgctgcgacctgggccggttcgcgttgacgtcatcgtcgatccgccgtggtcagacggg
cagataaattctgttcaggtcgtgacgggtgaccgtcctttccttgtcgacactgtggcg
tcctgcttgctgaggcacgggtggagggtcgaggacgtccggcatccgatcatcggtgtg
aaacgcgaccgcggcacgattgaggcggtcggaatgcccggtcggggaggttgtgcctcg
gagtcgtggatccacattgatgcgacggccccgcttggtaccgatatcggacaggcagcc
gagcaacttcgtgacgatttgtgtgcgtgccttgatcaggttgtttgtgccaccgatgac
tggggggcaatgcatgaagcaatgctgcgcactgctgagctcgtcagcgcttcctcagga
ccagccgatgatcgcgattcgagtcgtgagttacttgagtggctggctgatgatcacttc
atgtacctttcctaccaggaattcacggttgatggcgagacgatgactccggtcgcaggt
actcatcttggcatcgctgaggaggggcagcgatttgacgccgttccgcataatgacgat
aaggcgaccgttatcgtcaccaaggattcggtgcgctcggcagtacaacgcaatggttac
cgcgattacatcggggtaaggattcgtgacgagcacggcgccgtcgttgctgagcaccgg
ttccttggcctgctggggtccgcggcgtacacggagtctgtggcccatattccggtcttg
agggctaaggcgtctcgtatcctcgcgctgtctggctaccgcgctaactctcatagcgga
aaggcggttgttcgcacgattgctgagttcccgcgtgatgacttctttgaggcgtctgcc
gaggaactcgtgccgcttattatggccgttgtcgatctgcgtgagaagcagcgcttgcgt
gccctggtgcgtcggggcccatggggtcgttttttccaccttcttgtctttgttccggca
gatcgtttcgacgccagcactgtcggcgtcgttgagggaattgtggctaaacgcactggc
gcggtggaagttgactcgaccaccatgatgggggagtcctcgctggtacggatcacagtg
acagccaaggttgctgatggacaggtgctaccaccgatcgacgacgagaaattgcaggct
gaacttgcagatgccacctcgaactgggatgacgagttcatcaccttggccagtggcatt
cctagcaaccgacgaggagtcgatttcggccccgagtacaagcaagagttcaccgccaag
cagggcattttggatctggagctcctcaacggcctggctgaggatgatctgggactagtg
atgtatcgccccgatgacccagctgatccgtctgatttgcgactaaagatcttcaaccaa
cgggctccgatgacactttctcaggtgatgccacacctgtcgagcctgggtgttcagatt
attgatgaacatccccatcgcatcatattgcgcgggcgagaagtgtggctgttcgacctt
ggtctgcaaactcctggtgagctatggaaggtcgctggacgacgtcgtttcaccgaggcg
tttgcagcgtcgtggaagggggagtgcgagtctgacaccttctccggattggtgactgaa
gctggactgtcgtggtcccaagtagcgatgctgcgctgtatcgctcggtacctacgacag
ctcggtagccctttctcacagacgtacatggcgcgggctttgcgggctaatccgaacctg
gcaagggacctagtggggatcgttgaggcgaagttcgatcccactgcttttgatgatgga
gttgacgccggtccgcagcgtttggctaaggtcgaggaactgtccgagtccttcctcact
gaccttgaggaagtggcttcgcttgaccacgaccgcattttacgcatgatgcatgccgtc
atcagagctatgatccgtacgaactggtggcagagcggtcgacgggcgttggccttcaag
gtccgtcctaccgatctcggctttgccccggccccgcggcccaagtttgagattttcgtc
aactcgccacgagtgtccggaacccacctgaggtttggcgccgtcgcgcgaggtggcctg
cggtggtccgatcgccccgaggattttcgcaccgaagtactcggcttggtcaaggcgcag
atggtcaagaattcggttatcgtcccggccggtgccaagggcggatttgtgcctgctcat
ctacctgattcaacgaccaatcgcgcggaatgggctgcggaaggcaaggaatgctaccgc
attttcgtgtcttcgttgctgtcgctgacagataacgttgttgagggcaaggtcgtcgca
cctgaggacgtggttcgtcacgacggtgatgacccgtaccttgttgttgcggccgacaaa
ggcacagccaccttctctgataccgcaaatgccatcgctgccgaacaccacttctggctt
ggtgacgccttcgcctctggcggttcgcatggctacgaccacaaggcgatgggtatcacg
gcccgtggcgcgtgggaatcagtcactaggcacctggcagatctagggattgaccaggct
accgaggatttcacgtgcgttggcatcggcgatatgtcgggcgatgtcttcggtaatggc
atgctgttgagcaggcacatcaaattggttgctgctttcaaccaccgccatgttttcgtc
gatccgaacccagatcctgaggcgtcgtggcaagagcgtcgccgtctctttaaccttcct
cgctcaagttggggcgactacgactcttcccttatctctgagggtggtggcgtctgggat
cgcaccttgaagtcgatcccagtgagcccgcatatgcacgaggctttaggaattgacgct
tcggtgaaccggatgacgcccgatgacctcatctccgcgatcctgcgagcccccgtcgat
ctgttgtggaatggcggcattggcacctatgtgcgcgctaccagtgaaactgatgctcag
gtaggcgatcgtgctaacgatccggtgcgtgtcaccgccaaggacgttcgtgcgaaggct
gccggtgaaggtggaaacctaggttggactcaggctggccgtatcgagtatgcccgcaat
ggtggccgcattaacaccgacttcatcgacaactcggcaggagtagatacctcggaccac
gaagtcaacatcaagatcctcctggacgctgaggttgcggcaggccgaatcagcgaacaa
gaacgcgatgaattgctgccggccatggcggatgatgttgcttccctagtgttgcgccac
aaccattcacaaaacttggccttagctaacgcattgagctcagatggcccgactgcggga
gtgttagaagcgtggatgtgcgagttggaagagtcgggtcatcttgatcgcgctgtcgat
accatgccgtcgaccactgaaatgaaccggagaatggccgcaggggagagactcgctagt
ccggagctgtgcactctgctggcttggacgaagatcgccctgtgtgatgccgtgctggcg
acagacttgccggaggatcctttcgttgcggaccgcttggtgggctacttcccgccactt
ttgagggagaggttcactgagcggatgccgacacatcggctgcaccgtgagatcatcacg
accgaggccgtgaaccgtttcgtagattcgcagggtattacggcctactaccggttgcac
ctacagacgggggcagacattgcccaggtcatccgatgccagctagcagcacgctcggtg
ttcggactagggcgagtcgaaacggatctcacccacctcgggttggatgctgtccgtacc
gccaagattcgactcgcattgacagatcttgccatgcatgccacccggtggttcctcaac
catggtggcgccgacgacatcgctggcactatcgagacctaccggcctggtgtagctacg
cttgttgagaagttgtctgagcggctgcttggcgacagtgcggatgcctggcaggagaag
gtcgacgaggtcaccgagcttgggcttgatcgttctgacgccgcagttgttgccgcttat
gactggagcccagtactcctcagcatcgtagagatttcggaagagggccaccctcttgac
gaggttgcggatgcttatctgacgctggcccgccgcgtcgacatgattcgcctcaccagg
ctcgtcgagcagcttccgcaggatcgtccgacggatgccagagtgcgggcgagtttgcga
gaagatttgttgcgagtgatgtcggacgcgacccgacgcgccgttgtgattggaacagac
aatgttctggcagacggtggtcgtattgtgaagtcgatagcggcaaatccggatctagcg
cactgcgtcgtgatggtcagtgatctacggtccgccgtgggccaggaggtcacattgtga
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