Cutibacterium acnes TypeIA2 P.acn31: TIA2EST36_07955
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Entry
TIA2EST36_07955 CDS
T01655
Name
(GenBank) DNA ligase (NAD(+))
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
pax
Cutibacterium acnes TypeIA2 P.acn31
Pathway
pax03030
DNA replication
pax03410
Base excision repair
pax03420
Nucleotide excision repair
pax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TIA2EST36_07955
03410 Base excision repair
TIA2EST36_07955
03420 Nucleotide excision repair
TIA2EST36_07955
03430 Mismatch repair
TIA2EST36_07955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pax03032
]
TIA2EST36_07955
03400 DNA repair and recombination proteins [BR:
pax03400
]
TIA2EST36_07955
Enzymes [BR:
pax01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
TIA2EST36_07955
DNA replication proteins [BR:
pax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TIA2EST36_07955
DNA repair and recombination proteins [BR:
pax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
TIA2EST36_07955
NER (nucleotide excision repair)
GGR (global genome repair) factors
TIA2EST36_07955
MMR (mismatch excision repair)
DNA ligase
TIA2EST36_07955
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TIA2EST36_07955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
Nlig-Ia
PTCB-BRCT
NHase_beta_N
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AEW84167
LinkDB
All DBs
Position
complement(1716243..1718465)
Genome browser
AA seq
740 aa
AA seq
DB search
MVDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKK
VEDDHPELRTPDSPTQRVGAPQRITDFAPVKHLERLLSLDNVFTRDELSEWMNRVATAVG
KIPNFLCELKIDGLAVDLVYRDGQLVSGATRGDGRIGEDVTANVRTIAAIPRKLTGDDVP
RLLEVRGEVFFPVADFTDLNAALIEAGKNPFANPRNAAAGSLRQKDSRVTASRPLSMIVH
GIGVLEGHDFPSQGHAYDKLAQWGLPVSPYFKIVEHVDEVHEFVTRWGESRDEASHQIDG
VVVKVDDVSLQRKLGATSRAPRWAIAYKYPPEEVNTELLDIRVNVGRTGRVTPYGVMRPV
TVAGSTVEMATLHNAFEVKRKGVLIGDTVVLRKAGDVIPEILGPVVELRNGTEREFLMPD
HCPSCGAELAYEKNGDKDLRCPNAQGCPSQLHERVFGLASRGALDIEALGWEAAIALTDP
ENQRPGDDEVAEELPKRQTAVLSSEAGLFDLQLDDLAEVKVWRRRKVNGGPGPWQLEPYF
FTKATAKKPSTPTATTKKMFDELAKAKSQPLWRVLVALSIRHVGPTAARALATHFGSVEA
IREASVEELAGVDGVGEIIAESVKRWFEVDWHQEIISRWAAAGVRMADDRDEAPEQTLEG
LTVVVTGSLEGFSRDEAKEAIVSRGGKAAGSVSRKTDYVVVGENAGSKETKARDLGRPIL
DEAGFRYLLENGPQGITTIG
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggttgacgattccacccaaggtggcgagctggaggcgagcgaggctggggccgaagcg
cgccaccactggactgagttggcccagcgcatccttgacgcccaggacgcttactatgcc
cgcgacgctcccacgatctctgatgccgaatacgaccggcttatggttgaactcaagaag
gtggaggacgaccatccggagttgcgcactcccgactcgcccactcagcgggttggagct
ccacaacggataacagatttcgccccggtcaaacacctcgaacggctactgagcctggac
aacgtctttacccgcgacgaactgtcagaatggatgaacagggtcgctactgccgtcgga
aagatcccgaatttcctctgcgagctgaagattgacgggttggcggtcgacctcgtctac
cgagacgggcagcttgtatccggggcgacacgcggtgatggccgtatcggtgaggacgtc
accgcgaacgtgcgtacgatcgcggctataccccggaaactgactggcgacgacgtccct
cgtctgcttgaagttcggggcgaggtatttttcccggtcgctgatttcaccgacctcaac
gctgccctcatcgaggcaggtaagaacccctttgctaacccgcgcaatgcggctgccggt
tcgctgcggcagaaggactctcgggtgacggcgtcccggcctctgtcgatgatcgtccac
ggtattggggtgctggaaggtcacgatttccctagccaggggcatgcctacgacaagctt
gcgcagtgggggttacccgtctcgccgtacttcaagatcgtggagcatgtcgatgaggta
catgagttcgtgacccgctggggcgagtcccgcgacgaggcctcccaccagattgacggc
gtggtggtcaaggttgatgatgtctctttgcagcgcaagctgggtgccacctcgcgagct
ccccggtgggccatcgcatataaatacccgcctgaagaagtcaacaccgagctccttgat
atccgcgtcaatgttggaaggaccggtcgtgtcaccccgtacggggtcatgagaccggta
acagttgccgggtccaccgtcgagatggctaccctccacaacgctttcgaggtcaagcgc
aaaggagtgctcattggcgacaccgtggtgctgcgcaaggctggtgacgttattccggaa
atccttggcccggtggtggagctgcgtaacggcactgagcgggagtttcttatgcccgac
cactgcccgagctgtggggcagagctggcctacgaaaagaacggtgacaaggatcttcgc
tgccctaatgctcaaggttgtccctcccagctacacgagcgggtcttcggattagcgtca
cgtggcgccctcgacatcgaagctcttggttgggaggccgccatcgctctgactgatccg
gaaaaccagcgcccgggtgatgacgaggtcgctgaggaacttccgaaacgacaaacggca
gtgctgagctccgaggctggtctgttcgacctgcagctcgacgatctcgccgaggtcaaa
gtatggcgtcgtaggaaagttaacggcggcccaggcccctggcagcttgaaccctatttc
ttcacgaaggcgacagcgaaaaagccgtcgactccgactgccacgaccaagaaaatgttc
gacgagttagcgaaggccaagtctcagccgttgtggagagtgctggtcgccctgtctatc
cgtcatgtcggaccaacggcggcccgggctctggccacccacttcgggtcagttgaggcc
atccgggaagcgtccgtcgaggaacttgctggagtcgatggggtgggtgagattatcgcc
gaatcggtcaagcgatggttcgaagtcgactggcatcaggagattattagtcgatgggcc
gcagcgggagtgcggatggccgacgatcgtgacgaggcccctgagcagaccctcgagggg
ttgactgtggtcgtcacgggaagtctggagggattcagccgtgacgaggcgaaggaggcc
atcgtctcgcgcggaggaaaagcggctggatccgtctcccgaaagactgactacgtcgtc
gtgggggagaatgccggatccaaggaaaccaaggcgcgagacctgggccgtcccatcctt
gacgaggccgggttccggtatttgcttgaaaacggtccgcaggggatcacaaccatcggg
tga
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