Photorhabdus asymbiotica: PAU_00675
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Entry
PAU_00675 CDS
T00941
Symbol
ygcF
Name
(GenBank) conserved hypothetical protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
pay
Photorhabdus asymbiotica
Pathway
pay00790
Folate biosynthesis
pay01100
Metabolic pathways
Module
pay_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
PAU_00675 (ygcF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pay03016
]
PAU_00675 (ygcF)
Enzymes [BR:
pay01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
PAU_00675 (ygcF)
Transfer RNA biogenesis [BR:
pay03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PAU_00675 (ygcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
DUF5832
Motif
Other DBs
NCBI-ProteinID:
CAQ82767
UniProt:
A0ABX9SK65
C7BLC1
LinkDB
All DBs
Position
768990..769661
Genome browser
AA seq
223 aa
AA seq
DB search
MFYPINEIFQTLQGEGFFTGVPAIFIRLQGCPVGCSWCDTKHTWEKKAEKQQMLETILLK
TNESDEWGEASPKQIATLFVQQGYTARHVVITGGEPCIYDLIPLTEELENLGYQCQIETS
GTYHVECSAATWVTVSPKVKMRGGYQVLQQALQRANEIKHPVARERDIEALDELLATLDN
NSSRIIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttttacccgattaacgaaatatttcagacattgcagggagagggttttttcacggga
gtcccagcaatttttattcgtctgcaagggtgtccggtcggttgcagctggtgtgatact
aagcatacttgggagaaaaaagccgaaaagcagcagatgttggagacaatcttactgaag
acgaatgaaagtgatgaatggggtgaagcatcacctaagcaaattgcgacactttttgtt
caacagggatataccgcgcgccatgttgtgattactggtggtgagccttgtatttatgat
cttattcctttgacagaagaattggaaaatcttggctatcaatgtcagatagaaaccagt
ggtacgtatcatgttgaatgctctgctgctacttgggtgactgtttcaccaaaagttaaa
atgcgtggtggttatcaggtattgcagcaagctttgcaaagagctaatgaaataaaacat
ccagttgcacgggaaagagatattgaggcattagatgagttattggcgacattagataac
aactcatcgcgtattattgcattgcaaccgataagccagaaagaagacgctacccgttta
tgtattgaaacctgtattgcccgcaattggcggctttctatgcaaacacataaatatctg
aatattgcttga
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