Photorhabdus asymbiotica: PAU_02114
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Entry
PAU_02114 CDS
T00941
Symbol
nth
Name
(GenBank) endonuclease iii (dna-(apurinic or apyrimidinic site) lyase)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
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Photorhabdus asymbiotica
Pathway
pay03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PAU_02114 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pay03400
]
PAU_02114 (nth)
Enzymes [BR:
pay01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PAU_02114 (nth)
DNA repair and recombination proteins [BR:
pay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PAU_02114 (nth)
Prokaryotic type
PAU_02114 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
P_gingi_FimA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAQ84206
UniProt:
C7BJD8
LinkDB
All DBs
Position
complement(2381087..2381725)
Genome browser
AA seq
212 aa
AA seq
DB search
MNTQKRIEILTRLRDNNPKPTTELVFTTPFELLISVLLSAQATDVSVNKATAKLYPVANT
PQAILNLGVDGLKEYIKTIGLYNTKAENTIKTCRMLLEQHAGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVDEVENKLLRVVPSEFKVDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEFKEKIYPE
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccaaaaacgtatcgagattttaacgcgcttacgcgataacaacccaaagcca
acaactgagttggttttcacaacaccgtttgagctacttatttcagtattactttcagct
caagccaccgatgtgagtgttaacaaagccacagcgaaactctatcccgttgccaatact
cctcaggcaatccttaatctgggagtggatgggctgaaagaatatataaaaaccatcggt
ctgtataacacgaaagcagaaaacacaattaaaacctgtcgaatgctgctggaacaacat
gctggtgaagttcccgaagatcgcgctgcgttagaggcattaccgggtgttggccgcaaa
acggccaatgtggtgttaaacaccgcttttggctggccgacaattgctgttgatacacat
atctttcgggtttgtaatcgtacccaattcgctcccggtaagaatgtcgatgaagtcgaa
aataagttactgcgcgttgttcccagcgaatttaaagttgattgtcatcactggcttatt
ttgcatggccgttatacttgcatagcgcgtaaacctcgctgtggttcttgcattattgaa
gatttatgcgaatttaaagaaaaaatttaccctgagtaa
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