Paenarthrobacter sp. YJN-5: HMI59_07920
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Entry
HMI59_07920 CDS
T10115
Name
(GenBank) multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
payj Paenarthrobacter sp. YJN-5
Pathway
payj00020
Citrate cycle (TCA cycle)
payj00630
Glyoxylate and dicarboxylate metabolism
payj00785
Lipoic acid metabolism
payj01100
Metabolic pathways
payj01110
Biosynthesis of secondary metabolites
payj01120
Microbial metabolism in diverse environments
payj01200
Carbon metabolism
payj01210
2-Oxocarboxylic acid metabolism
Module
payj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
payj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
payj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HMI59_07920
00630 Glyoxylate and dicarboxylate metabolism
HMI59_07920
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HMI59_07920
Enzymes [BR:
payj01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
HMI59_07920
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
HMI59_07920
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
HMI59_07920
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
HMI59_07920
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
QOT16537
LinkDB
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Position
complement(1659670..1663470)
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AA seq
1266 aa
AA seq
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MPEQPSHRLPEEFGGNEWLVDELYERYQQDKNSVDAKWWPLFESFNTSEGTSSNGNSAAA
TAANPPTQVLPVVAPAAAAPAPAPAAPKAAPAPAAASPAPAPAKKEPATVARDGAKKPTG
GNAAQPIPAQLPKNTKAPTAPEEDVVSVLRGPAKAIASNMVTSLEVPTATSVRAVPAKLL
IDNRVVINSNLARARGGKVSFTHLIGYAVVRALSQFPSMNVYYDEIDGKPSAVQPAHVNF
GIAIDMPKPDGTRLLMVPNIKKAETMDFAEFWHTYEDLIKRARNSKLTADDHAGTTVSLT
NPGGIGTVHSVPRLSKGQAAIIGVGALDYPAEFQGASEKIIAQNAISKILTLTSTYDHRV
IQGAGSGEFLKLVHQLLLGAQNFYDEIFEALRIPYEPVRWSPDLQVDPADEINKVARIQQ
LIHSYRVRGHLMADTDPLEYVQRKHPDLDVLTYGLTLWDLDREWPTGGFGGKPQLKFRDI
LGVLRDAYCRTTGIEYMHIQEPAERKWFQDELEHPYSKPSREEQLRIVSKLNAAEAFETF
LQTKFVGQKRFSLEGGESLIPLLDAIISDAADDGLDEVAIGMAHRGRLNVLTNIAGKTYA
QVFREFEGTQDPRSVQGSGDVKYHLGTEGTFTSDNGKQTKVYLAANPSHLEAVDPVLEGI
VRAKQDRLDQGESFPVLPIMVHGDAAFAGQGVVAETLNLSQLRGYRTGGTIHVIVNNQVG
FTTAPSSSRSSTYSTDVAKMIQAPVFHVNGDDPEAVVRVAQLAYQFRQRFHKDVVIDMVC
YRRRGHNEGDDPSMTQPLMYNLIEAKRSVRKLYTESLIGRGDITEEEAEQLLRDYQERLE
RVFAETHAAQTSPIPIITADSAAVSDIERPIAQQADFGTNSPASTAISAETLARIGKAHV
EIPDGFTVHSKLKQLLEKREQMSREGGIDWGFGEIAAFGSLIMEGVPVRLAGQDSRRGTF
VQRHAVFHDRANGNEWLPLANLSDDQAKLWIYDSLLSEYAAMGFEYGYSVERPDALVLWE
AQFGDFVNGAQTIIDEFISSAEQKWGQRSSLVLMLPHGYEGQGPDHSSARIERFLQLCAE
DNMIVANPTTSASHFHLLRRQAYSRPRKPLIIFTPKQLLRLKGAASAVEDFTTGAFRPVI
GEHELQPANVDRVVLVSGRLYYDLLSNRQKSGDTSTAIIRVEQLYPLPIAEIEAELAKYP
NADIVWAQDEPANQGPWPFMGLNLAPQLDRKVRLVSRPASASTAAGSMKRHAAEQDALIK
QVFERQ
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
gtgccagagcagcccagccaccgtctaccagaggaatttggcggaaacgagtggctcgtt
gacgaactgtacgagcggtaccagcaggacaagaattcggtcgacgccaaatggtggccg
cttttcgagtccttcaataccagcgagggcacttcttccaacggaaattctgcagccgcc
acggctgccaatccccctacccaagtacttcccgtagtagccccggctgcagcggctccg
gcaccggcgccggccgcgcccaaggctgctcctgcccctgctgctgcctctccggcaccg
gcaccggcgaagaaagaaccggccacggttgccagggacggggcaaagaagcccaccggc
ggcaacgcggcacagccgatcccggcccagctgcccaagaacaccaaggcgcccacggcg
ccggaagaggacgtcgtttcagtcctccgcggccccgcaaaggccatcgcctccaacatg
gtcaccagcctcgaagtgcccaccgccaccagcgtgcgggcagtaccggccaagttgctc
attgacaaccgcgtagtcatcaactccaaccttgcacgcgcccgcggcggcaaggtgtcc
ttcacgcacctcattggctacgccgtggtccgcgcgctttcccagttcccgtcgatgaac
gtctactacgacgaaatcgatggcaagcccagcgcagtccagcccgcccacgtcaacttc
ggcatcgccattgacatgcccaagcccgacggcacccgcctcctgatggttcccaacatc
aagaaggcggagaccatggacttcgcggagttctggcacacctatgaggacctcatcaag
cgtgcccggaacagcaagctcaccgccgacgaccacgccggcaccaccgtgtccctcacc
aaccccggcggcatcggcaccgtccactcggttccccgcctctccaagggccaggccgcg
atcatcggcgtcggcgcgctcgactacccggccgagttccagggcgcgagcgagaagatc
atcgcccagaacgccatcagcaagatcctgacgctgacctccacctacgaccaccgcgtc
atccagggtgcaggcagcggcgagttcctcaagctggtccaccagctcctcctgggcgcc
cagaacttctacgacgagatcttcgaagcgctgcgcattccgtacgagcccgtccgctgg
agcccggacctccaggttgatccggcagacgaaatcaacaaggttgcccggatccagcag
ctcatccactcctaccgggtccgcggccacctgatggccgacaccgatcccctggagtac
gtccagcgcaagcacccggaccttgacgtcctcacctacggcctgaccctgtgggacctg
gaccgcgaatggcccacgggcggtttcggcggcaagccgcagctgaagttccgtgacatc
ctcggcgtccttcgcgacgcttactgccgcaccaccggcatcgagtacatgcacatccag
gaacctgccgagcgcaagtggttccaggacgaactggagcacccctactccaagcccagc
cgcgaagaacagctgcgcatcgtctccaagctcaatgccgcagaggctttcgaaaccttc
ctgcagaccaagttcgtgggccagaagcggttctcgcttgaaggcggcgagtccctgatt
ccgctgctggacgccatcatctccgatgctgccgacgacggactggacgaggtggccatc
ggaatggcgcaccgcggccgcctgaacgtgctgaccaacatcgccggcaagacctacgcc
caggtgttccgtgagttcgaaggcacccaggacccgcgctccgtgcagggttccggcgac
gtcaagtaccacttgggtaccgaaggcaccttcacctcggacaacggcaagcagaccaag
gtgtacctggcggccaacccgtcccaccttgaagccgtcgacccggtcctggaaggcatt
gtccgcgcgaagcaggaccgcctggaccagggcgagtccttccccgtcctgcccatcatg
gtccacggcgacgctgcctttgcaggccagggtgttgttgctgagaccctcaacctctcc
cagctccgcggataccgcaccggcggcacgatccacgtgatcgtgaacaaccaggtgggc
ttcactacggctccgtcttcctcgcgctcgtccacatactccacggacgtcgcgaagatg
atccaggcaccggtcttccacgtgaacggtgacgatcccgaggctgttgtccgcgtggcg
cagctggcgtaccagttccgccagcgcttccacaaggacgtcgtcatcgacatggtctgc
taccgccgtcgcgggcacaacgagggcgacgacccctcgatgacgcagccgctgatgtac
aacctcatcgaggccaagcgctccgtccgcaagctgtacaccgaatccctgatcggccgt
ggcgatatcaccgaggaagaagccgagcagttgctccgcgactaccaggagcgcctggag
cgggtcttcgcggagacgcatgcagcgcagacctcgcctatcccgatcatcactgcggac
tctgcagctgtatcggacatcgagcgtcccattgcccagcaggcggactttggcaccaac
tcccccgcgtccacggccatttcggccgaaacccttgcacggatcggcaaggcccacgtg
gagatccccgatggcttcacggtgcactccaagctcaagcagctgctggagaagcgcgag
cagatgtcccgtgagggcggcatcgactggggctttggcgagatcgcagcctttggttcg
ctcatcatggaaggcgttcccgtccgcctggccggccaggactcgcgccgtggcacgttc
gtccagcgccacgcagtcttccacgaccgcgccaacggcaacgagtggctgcccctggcg
aacctctctgacgaccaagccaagctgtggatctacgactccctcctgtccgaatacgca
gccatgggcttcgaatacggatactccgtggagcgtccggatgccctggtgctgtgggag
gcgcagttcggcgacttcgtcaacggtgcgcagaccatcattgacgagttcatctcctcg
gcagagcagaagtggggccagcgttcttccctggtcctgatgctgccgcacggctacgag
ggccagggcccggaccactcctcggcccgtattgagcgcttcctgcagctgtgcgctgag
gacaacatgatcgtcgcgaatccgacgacgtccgcatcgcacttccacctgcttcgccgc
caggcctacagccggccccgcaagccgctgatcatcttcacgccgaagcagttgctgcgc
ctcaagggcgccgcgtccgccgtcgaggacttcaccaccggtgcattccggccggtcatc
ggcgagcacgagctccagccggccaatgtggaccgcgtagtcctggtctccggccgcttg
tactacgacctcctgtctaaccgccagaagtccggcgacacgtccactgcgatcatccgc
gtggagcagctctacccgctgcccatcgctgagatcgaagctgagctcgccaagtacccg
aacgccgacatcgtgtgggcacaggatgagcctgccaaccagggtccgtggccgttcatg
ggcctgaacctggcgccgcagctggatcgcaaggtccgcctggtgtcgcgtccggcatcg
gcttccaccgcggccggttccatgaagcgtcacgctgctgaacaggatgccctgatcaag
caagtgttcgaacgtcagtag
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