Paenarthrobacter sp. YJN-D: HMI60_01180
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Entry
HMI60_01180 CDS
T10599
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
payn Paenarthrobacter sp. YJN-D
Pathway
payn00300
Lysine biosynthesis
payn00550
Peptidoglycan biosynthesis
payn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
payn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HMI60_01180
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMI60_01180
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
payn01011
]
HMI60_01180
Enzymes [BR:
payn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HMI60_01180
Peptidoglycan biosynthesis and degradation proteins [BR:
payn01011
]
Precursor biosynthesis
Amino acid ligase
HMI60_01180
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
EF-1_beta_acid
Motif
Other DBs
NCBI-ProteinID:
QOT20250
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Position
245064..246707
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AA seq
547 aa
AA seq
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MSEHKEAASNTATPDAGRSAFRPASVAAVPLAAIAGALGVTAPDGSQDLGVTGITLNSRA
VEPGDLYMALPGATRHGADFVPQAVEAGAVAVVTDDAGARQLALATEQPVPVLIIAEPRA
AVGPLSALIYRSQPEDAAFPSLFGVTGTNGKTTTTYFINSLLRALGKQPGLIGTIEIVAG
GEPIPSLLTTPESPDVHALLALMRERGLDAASMEVSSHAISYRRVDSVMFDVAGFTNLTQ
DHLDLHGSMEEYFHTKAELFTAGRARQAVVTVDDEWGCKLAGLADIPVTTLSAASSSGAP
DADWHVASINPRGLGSEFELHHTDGRTLRVHTGLPGDFNVANAALATVMVLASGVNESEL
QDALDAHDPFTVAVPGRMQLVSTEPAAVVDFAHNPDALARALMAVRSPEEESRVIVVFGA
TGQRDQGKRPTMGAIAARLADVVIISDDDPHDEDAAAIRAEVLAGAFAAREGENLGSEII
ESYPRDAAIRLAVDLATAKDTILIAGRGHEVWQEVQGVNLALDDRVELRAALTSKGFSVS
SDQRIES
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagagcacaaagaggcagcttccaataccgcgacgccggatgccggacggtcagct
ttccgtcccgcatccgttgctgcggtgcccctggcggccatagcgggagcgctgggagta
acggcccctgacggcagccaggaccttggcgtcaccggcatcacgctcaattcccgtgcc
gttgaaccgggcgacctctacatggccctgccgggcgccacgcgccatggtgccgatttc
gtaccccaagccgtggaggccggtgccgtcgcagtggttacggacgacgccggtgcacgc
cagcttgcgctggcaaccgagcagcccgtccctgtcctcatcattgcggagccgcgggcc
gccgtcgggcctttgtccgcgctgatctatcgcagccaaccggaggatgcggccttcccg
tcgcttttcggcgtcacggggaccaatggcaagaccaccaccacttacttcatcaactcg
ctgctgcgtgccttgggcaagcagcctggcctgatcgggaccatcgagatagtggccggg
ggagaacccatcccgagcctcctgaccaccccggagtccccggatgtccacgcactgctc
gcattgatgcgggagcggggcctggacgcggcgtccatggaggtttcatcgcacgcgatc
tcctaccgccgggtggactctgtcatgttcgacgtcgctggattcaccaacctcacccag
gatcatctggacctccacggcagcatggaggagtacttccacaccaaggccgaactcttc
accgccggacgcgcacgccaggctgttgtcacggtcgacgacgaatggggttgcaagctt
gccggcctggcggacattccggtcaccacactttcagcggcttcttccagtggcgccccg
gacgctgactggcacgtcgcgtccatcaacccgcgcgggttgggttcggaattcgaactg
caccacacggacggccggaccttgcgggtccacaccggcttgccgggcgacttcaacgtg
gcaaacgcggcgttggctaccgtcatggtcctggcgtccggggtgaatgaatccgagctc
caggacgccttggatgcccacgatccttttacggttgctgttcccgggcgcatgcagctc
gtctccacggagcccgccgccgttgttgattttgcccacaatcccgatgccctggcccgt
gcactgatggcggtccggtcaccggaggaagagtcgcgcgtcatcgtggtttttggcgcc
acaggacaacgtgaccaaggcaaaaggcctaccatgggcgcaatcgcggcccgtctggcc
gacgtcgtgattatcagcgatgacgacccccacgatgaggatgccgccgccatccgcgct
gaggtgctggcgggcgcctttgctgcgcgggagggagagaacctgggcagcgagatcatc
gagtcctacccgagggatgctgccatccgcctcgccgttgacctggcgacggcgaaggac
accatcctcatcgcaggacgcggccacgaggtgtggcaggaagtacaaggcgtaaacctc
gccctggacgacagggtcgagttgcgggccgccttgacatccaagggattcagcgtttca
tccgaccagcggatagagtcctaa
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