Paraburkholderia sp. 22B1P: PBP221_04950
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Entry
PBP221_04950 CDS
T10680
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz01501
beta-Lactam resistance
pazz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PBP221_04950
01503 Cationic antimicrobial peptide (CAMP) resistance
PBP221_04950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pazz03036
]
PBP221_04950
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pazz02000
]
PBP221_04950
01504 Antimicrobial resistance genes [BR:
pazz01504
]
PBP221_04950
Chromosome and associated proteins [BR:
pazz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PBP221_04950
Transporters [BR:
pazz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PBP221_04950
Antimicrobial resistance genes [BR:
pazz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PBP221_04950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
BSH_CusB
HH_EMRA
YknX_C
HH_YBHG
BSH_CzcB
BSH_YhbJ
WxLIP_HBD
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
BEU20355
LinkDB
All DBs
Position
1:561772..562884
Genome browser
AA seq
370 aa
AA seq
DB search
MTVQPQAVPVVTELPGRTSAFLVAQVRARVDGIVLRREFTEGTQVKAGQRLYKIDPAPYI
ATLNNAKASLAKAQANLVSTTAQANRFKVLVAANAVSKQDYDNAVASEGQAAADVAAGKA
AVDTAQINLGYTDVVSPVTGQVGISQVTPGAYVQASQATLMSTVQQLDPVYVDVTQSSLA
GLKLRRDIQSGRLKTSGPDAAKVELVLEDGRVYSDKGKLQFTDVTVDQATGSVTIRAIFQ
NKDHVLLPGMFVRARIEEGVNESALLVPQIGVTHDQKGQPTALVLNKEDKVELRTLQATA
TYGQYWVVEGGLSAGDRVIVNGVDKVRPGATAKAVPAQLPPSPASDAAASAPAGAQAASG
AAAASAASGA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtccagccgcaagccgtgcctgtcgtcaccgaattgccgggccgcaccagtgcg
ttcctcgtcgcgcaggtgcgcgcgcgggtcgacggcatcgtgctgcgccgcgagttcacg
gaaggcacgcaggtcaaggccggccagcgtctgtacaagatcgatccggcgccgtacatc
gcgacgctgaacaacgcgaaggcgtcgctcgcgaaggcccaggctaacctcgtgtcgacc
accgcacaggccaatcgcttcaaggtgctggtcgcggcgaacgcggtgtcgaagcaggac
tacgacaacgccgtcgcatccgaaggccaggctgccgctgatgtcgcggccggcaaggcc
gccgtcgataccgcgcagatcaacctcggctacacggacgtcgtttcgcccgtcacgggc
caggtcggcatctcgcaggtgacgccgggcgcatacgtgcaggcgagccaggcgacgctg
atgtcgaccgtgcagcaactcgatcccgtctacgtcgacgtcacgcagtcgagcctcgcg
ggcctcaagctgcgccgcgacatccagtcgggccggctgaagacctcgggtccggacgcc
gcgaaggtcgaactggtgctcgaagacggccgcgtctattcggataagggcaagctgcag
ttcaccgacgtcaccgtcgaccaggccacgggctccgtgacgattcgcgcgatcttccag
aacaaggatcacgtgctgttgccgggcatgttcgtgcgcgcgcgcatcgaggaaggcgtc
aacgaaagcgcgctgctggtgccgcagatcggtgtcacgcacgaccagaagggtcagccg
acagcactcgtcctcaataaggaagacaaggtcgagctgcgcacgctgcaggctacggcg
acctacggccagtactgggtcgtcgaaggcggcctgagtgcgggcgaccgtgtgatcgtg
aacggcgtcgacaaggtgcgtccgggcgcaacggccaaggccgtgccggcgcaactgccg
ccgtcgcccgcttcggacgcagccgcgtcggctccggccggcgcacaggcagccagcggc
gcggccgcggcctctgctgcatcgggcgcgtaa
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