Paraburkholderia sp. 22B1P: PBP221_04960
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Entry
PBP221_04960 CDS
T10680
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz01501
beta-Lactam resistance
pazz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PBP221_04960
01503 Cationic antimicrobial peptide (CAMP) resistance
PBP221_04960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pazz02000
]
PBP221_04960
01504 Antimicrobial resistance genes [BR:
pazz01504
]
PBP221_04960
Transporters [BR:
pazz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PBP221_04960
Antimicrobial resistance genes [BR:
pazz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PBP221_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
BEU20356
LinkDB
All DBs
Position
1:562903..566106
Genome browser
AA seq
1067 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIILMLAGLASIFTLPVAQYPTIAPPAVQISATYPGASAKTVENT
VTQVIEQQMSGLDHLLYLSSTSDDSGTATITLTFAAGTNPDIAQVQVQNKLQLATPLLPQ
AVQQLGTKVTKSSSSFLLVMAFVSTDGSMNKYDLANYVASNVQDPVSRIDGVGTVTLFGT
QYAMRIWLDANKLTNFGLTPVDVQAALQAQNVQVAGGSLGGTPSVPGQLLQATISEATLL
TTPEQFGNILLKVNQDGSQVRLKDVSHIELGGENYNFDTKYNGQPTAGFGIQLATGANAL
ATAKAVRDKIDQLSKYFPHGLIVKYPYDTTPFVRLSIEEVVKTLLEGIVLVFLVMYLFLQ
NLRATLIPTIAVPVVLLGTFAIMSAVGFSINVLSMFGLVLAIGLLVDDAIVVVENVERVM
SEEGLSPREATRKAMDQITGALIGVALVLSAVFVPVAFSGGSVGAIYRQFSLTIVAAMVL
SVLVALILTPALCATILKPIPQGHHEEKKGFFGWFNRNFDKSRDKYHSGVHHVIKRSGRW
LIIYLVVIVAVGLLFVRLPKSFLPDEDQGTMFVLVQTPSGSTQETTARALKDVSDYLLND
EKSIVESTFTVNGFSFAGRGQNAGLVFVRMKDYAERQHANQKVQALVGRMFMHFVGYKNA
TVFPVNPPSIPELGTASGFDFELQDRAGLGHDKLMAARNQLLGMASKDPMLAQVRPNGLN
DTPQFKVSIDHEKAASQGVSLAAIDQTFSIAWASQYVNNFLDTDSRIKKVYVQADPRFRM
TPENLNDWYVRNSAGTMVPFSSFASGQWTYGSPKLERYNGISAVEIQGQASPGKSTGQAM
TAMEALAAKLPAGIGYEWTGLSFQERQSGSQAPILYGISILVVFLCLAALYESWSIPFSV
IMVVPLGVLGALLAATLRGLENDVFFQVGLLTTVGLSAKNAILIVEFARELQQGEGMGPV
EAALEAARLRLRPILMTSLAFILGVLPLAISNGAGSASQHAIGTGVIGGMLTATFLAIFM
IPMFFVVIRAKFTGDKEDPDEAMKHYNEHHPHDPQGGSGPGNAGGGH
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttttttatcgatcgcccgatcttcgcgtgggtgatcgccatcattctgatg
ctggcgggtctggcgtcgatcttcacgctgccggttgcgcaatatccgacgattgcgccg
ccggccgtgcagatcagcgcgacgtatccgggtgcatcggcgaagacggttgaaaacacc
gtcacgcaggtgatcgagcagcagatgagcggcctcgaccacttgctgtacctgtcgtcg
acttccgacgactcgggcacggccaccatcacgctgacgttcgcggcgggcaccaacccc
gacatcgcgcaggttcaggtgcagaacaagctgcagctggcgacgccgctgctgccgcaa
gcagtgcagcagctcggcacgaaagtgacgaagtcgagcagcagcttcctgctggtgatg
gcgttcgtgtcgaccgacggcagcatgaacaagtacgacctcgcgaactacgtcgcgtcg
aacgtgcaggacccggtcagccgtatcgacggcgtgggtacggtcacgctgttcggcacg
cagtacgcgatgcggatctggctcgacgccaacaagctgaccaacttcggcttgacgcct
gtcgatgttcaggccgcgctgcaggcgcagaacgttcaggtggcgggcggctcgctcggc
ggcacgccgtcggtgccgggccagttgctgcaggcgacgatcagcgaagcgacgctgctg
actacgcccgagcagttcggcaacattctgctgaaggtcaaccaggacggctcgcaggtg
cgcctcaaggacgtctcgcacatcgagctgggcggcgaaaactacaacttcgacaccaag
tacaacggtcagccgacggcgggcttcggtatccagctggcgacgggcgcgaatgcgctg
gcgacggcgaaggccgtgcgcgacaagatcgaccagttgtcgaaatacttcccgcacggt
ctcatcgtgaagtatccgtacgacacgacgccgttcgtgcgcctgtcgatcgaagaagtg
gtcaagacgctgctcgaaggtatcgtgctggtgttcctggtcatgtacctgttcctgcag
aacctgcgcgccacgctgatcccgacgatcgcggtgccggtggtgctgctgggcacgttc
gcgatcatgagcgccgtcggcttctcgatcaacgtgctgtcgatgttcggtctcgtgctc
gcgatcggtctgctggtggacgatgcgatcgtggtggtggagaacgtcgagcgggtgatg
tccgaggaaggcttgtcgccacgcgaggcaacccgcaaggcgatggaccagatcacgggc
gcgctgatcggcgtggcactggtgctgtccgcggtgttcgtgcctgtcgcgttctcgggc
ggttcggtcggcgcgatttaccggcagttctcgctgaccatcgtcgcggcgatggtgctg
tccgtgctggtcgcgttgattctgacgccggcgctgtgcgcgacgattctcaagccgatt
ccgcagggccatcacgaagagaagaagggcttcttcggctggttcaaccgcaacttcgac
aagagccgcgacaagtatcactcgggcgtgcaccacgtgatcaagcgctcgggccgctgg
ctcatcatctatctggtggtgatcgtcgcggtgggtctgctgttcgtgcgtctgccgaag
tcgttcctgccggatgaagaccagggcacgatgttcgtgctggtgcagacgccgtcgggc
tcgactcaggagacgacggcgcgcgcgttgaaggacgtgtccgactacctgctcaacgat
gaaaagagcatcgtcgaatcgaccttcaccgtgaacggcttcagctttgcgggccgcggc
cagaacgccggtctcgtgttcgtgcggatgaaggactacgcggaacgccagcatgcgaac
cagaaggtgcaggcgctggtgggccggatgttcatgcacttcgtcggctacaagaacgcg
actgtgttcccggtcaatccgccgtcgattcccgaactgggtacggcgtcgggcttcgac
ttcgaactgcaggaccgcgcgggtctcggccacgacaagctgatggcggcgcgtaaccag
ttgctcggcatggcgtcgaaggacccgatgctcgcgcaggtgcgtccgaacggcctgaac
gatacgccgcagttcaaggtgtcgatcgatcacgagaaggcggcgtcgcaaggcgtgagc
ctcgcggccatcgaccagacgttctcgattgcctgggcgtcgcagtacgtgaacaacttc
ctcgatacggacagccggatcaagaaggtgtacgtgcaggccgacccgcgtttccgcatg
acgccggaaaacctgaacgactggtacgtgcgcaactcggcgggcacgatggtgccgttc
tcgtcgtttgccagcggccagtggacctacggttcgccgaagctcgaacgctacaacggt
atctcggccgtcgaaatccaggggcaggcgtcgccgggcaaatcgacgggtcaggcgatg
accgcgatggaagcgctcgcggcgaagctgccggcgggtatcggctacgaatggacgggt
ctgtcgttccaggaacgtcagtctggttcgcaggcgccgattctgtacggtatctcgatc
ctcgtcgtgttcctgtgtcttgccgcgctgtatgaaagctggtcgattccgttctcggtg
atcatggtggtgccgctcggcgtgctgggcgcgctgctcgccgcgacgctgcgcgggctg
gaaaacgacgtgttcttccaggtcggtctgctgactacggtgggtctgtccgcgaagaac
gcgattctgatcgtcgagttcgcgcgcgaactgcagcagggcgaaggcatggggccggtg
gaagcggcgctcgaagcggcgcgtctgcggctgcgcccgatcctgatgacgtcgctcgcg
ttcattctcggcgtgctgcccctcgcgatcagcaacggcgcgggctcggcaagccagcac
gcgatcggtacgggcgtgatcggcggtatgttgacggcgaccttcctcgcgattttcatg
atcccgatgttcttcgtcgtgattcgcgcgaagttcaccggcgacaaggaagacccggac
gaagcgatgaagcactacaacgagcaccatccgcatgacccgcagggtggcagcggcccg
ggcaacgccggcggaggacattga
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