Paraburkholderia sp. 22B1P: PBP221_80960
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Entry
PBP221_80960 CDS
T10680
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz01501
beta-Lactam resistance
pazz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PBP221_80960
01503 Cationic antimicrobial peptide (CAMP) resistance
PBP221_80960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pazz03036
]
PBP221_80960
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pazz02000
]
PBP221_80960
01504 Antimicrobial resistance genes [BR:
pazz01504
]
PBP221_80960
Chromosome and associated proteins [BR:
pazz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PBP221_80960
Transporters [BR:
pazz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PBP221_80960
Antimicrobial resistance genes [BR:
pazz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PBP221_80960
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
BSH_CusB
Beta-barrel_RND_2
YknX_C
HH_YBHG
BSH_YhbJ
HH_EMRA
Adeno_PV
HH_AAEA_pHBA
DUF4999
WxLIP_HBD
Motif
Other DBs
NCBI-ProteinID:
BEU27956
LinkDB
All DBs
Position
p22B1P1:complement(2421915..2423135)
Genome browser
AA seq
406 aa
AA seq
DB search
MPALLKNRNFRLLAATAAISAIIPFFAACSDKPAAPPQQTPEVGVVSVNPTGVPVTVELP
GRVSAHLVAEVRARVDGIVLKRAFTEGSEVKAGQTLYKIDPAPYLASLNSAKATLAKAQA
TLVSTHAEAERYKVLVAANAISKQDYDNAVASEGQAAADVAAGKAAVETAQINLGYTDVT
SPISGRIGKSSVTEGAYVQSSAATLLATVQQLDPVYVDLTQSSLVGLKLRRDAQEGRLKT
SGPNAAKVTLILEDGRPYGGTGKLEFSDVTVDQTTGSVTVRALFDNAQRVLLPGMYVRAK
IEEGINEQAYVVPQQGVTHDQKGDPTALVVGADGKVATRQLVTSGTYGANWVVESGLQTG
DRVIVQGVDKVRPGMTVKTVDAQLPEADAAAQTAAAAPASDAHSAQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgctattaaagaaccgtaactttcgtttgctcgcggccacggctgcgatttcc
gccatcattccgtttttcgccgcgtgcagcgacaagcccgcagcgccgcctcaacagacg
cctgaagtcggcgtcgtcagcgtcaacccgacgggcgtgcccgtgaccgtcgaactgccg
ggccgcgtgagcgcgcatctcgtcgccgaagtgcgcgcgcgtgtcgacggcatcgtgctg
aagcgcgccttcacggaaggcagcgaagtcaaggcggggcagacgctctacaagatcgat
cccgcgccgtacctcgcctcgctcaacagcgcgaaggcgacgctcgcgaaggcgcaggcc
acgctggtgtcgacgcatgcggaagccgagcgctacaaggtgctggtcgctgcgaacgcg
atcagcaaacaggactacgacaacgccgtcgcctcggaaggccaggccgccgccgatgtc
gcagccggcaaggccgccgtcgaaacggcgcagatcaacctcggctataccgacgtgacc
tcgccgatttcggggcgcatcggcaagtcgtcggtgacggaaggcgcgtacgtgcagtcg
agcgcggcgacgctgctcgccacggtgcaacagctcgatcccgtctacgtggacctcacg
caatcgagtctcgtcggcctcaagttgcgccgcgacgcgcaggaagggcgcctcaagacg
agcggcccgaacgcggcgaaggtcacgctgatcctcgaagacggccgtccgtatggcggc
acgggcaagctcgaattctccgacgtgaccgtcgaccagaccacaggctccgtcaccgtg
cgcgcgctgttcgacaacgcgcagcgcgtgttgctgccgggcatgtacgtgcgcgcgaag
atcgaggaaggcatcaacgagcaggcgtacgtcgtcccgcaacagggcgtcacgcacgac
cagaagggcgatccgaccgcgctcgtcgtcggcgcggacggcaaggtcgcgacgcggcaa
ctggtgacgtccggcacgtatggcgcgaactgggtggtcgagagcggcctgcaaacgggc
gaccgcgtgatcgtgcaaggcgtcgacaaggtgcgccccggcatgacggtgaaaacggtc
gacgcacaactgcctgaagccgatgccgccgcgcagacagcagccgcagcgcccgcgtcc
gacgcgcacagcgcgcagtaa
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