Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4626
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Entry
PSEBR_a4626 CDS
T01472
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba00300
Lysine biosynthesis
pba00550
Peptidoglycan biosynthesis
pba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSEBR_a4626
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSEBR_a4626
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pba01011
]
PSEBR_a4626
Enzymes [BR:
pba01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PSEBR_a4626
Peptidoglycan biosynthesis and degradation proteins [BR:
pba01011
]
Precursor biosynthesis
Amino acid ligase
PSEBR_a4626
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PipB2_N
Motif
Other DBs
NCBI-ProteinID:
AEA71042
UniProt:
F2K5A7
LinkDB
All DBs
Position
complement(5628508..5629971)
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AA seq
487 aa
AA seq
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MSLSLNKIFAHAGHDLLIRELALDSRNVRAGDLFLAVPGARFDGRDHIADALKRGAAAVA
YEVQGATVLPITDVPLIPVKGLAAQLSDIAGRFYGDPSRHLNLVGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGNGFHGALESGLHTTPNPIAVQATLADLKKAGAKAVAMEVSSHG
LDQGRVTALAFDVAVLTNLSRDHLDYHGTMQAYGEAKAKLFAWNDLKCRVINLDDEFGRQ
LAAEKRESRLITYSLEDAGAYLYVRQAQFNDEGVRATLVTPQGEHHLRSTLLGRFNLSNV
LAAIGALLGLDYALDEILKVLPKLEGPAGRMQRLGGGTQPLVVVDYAHTPDALEKVLTAL
RPHAKGKLLCLFGCGGDRDRGKRPLMAEVVERLADGVLVTDDNPRTEDPQRIFDDIRAGF
MAVDNVTFVAGRGQAIAQLIASASADDVIVLAGKGHEDYQEINGERHAFSDLVEADHALT
AWEVAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgagcctgaacaagatttttgcccacgccggtcacgatctgctgattcgtgag
ctggccctggacagccgcaatgtccgcgccggggatttgttcctggcggtgccgggtgcc
cgtttcgatggtcgcgaccatattgccgatgccctgaagcgtggcgcggctgccgtggct
tatgaagtgcaaggcgcgacagtgctgccgatcaccgacgttccgctgattccggtcaag
ggcctggcggcgcagctgtcggacatcgccgggcgattctatggcgacccgagccgtcac
ctgaacctggtgggcgtgaccggcaccaacggcaagaccagcgtgacccaactggtggcc
caggccctcgacctgctcggccagcattgcggcattgtcgggaccctgggcaacggcttc
catggcgcgctggaaagcggactgcacaccacgccgaacccgattgccgtgcaagcgacc
ctggcggacctgaaaaaggctggtgccaaggccgttgcgatggaagtctcttcccatggt
ttggaccagggccgtgtgaccgcgctggcgttcgatgtcgcggtgttgaccaacctgtcc
cgggatcacctggattatcacggcaccatgcaggcctacggtgaagccaaggccaagctg
tttgcctggaatgacctgaagtgccgggtcatcaacctcgatgacgaattcggtcggcaa
ctggctgccgaaaagcgcgagtcgcggttgatcacctacagcctggaagatgccggcgcc
tatctttatgtacgccaggcgcaattcaatgacgaaggcgtgcgcgccaccttggtcacg
ccccagggcgagcaccatttgcgcagcaccttgctcggccgtttcaacctgagcaacgta
ttggcggccatcggtgccttgctcggcctggactacgcgctggacgaaattctcaaggtc
ttgccgaagctcgagggcccggccggtcgcatgcagcgtttgggcggtgggactcaacca
ctggtggtggtcgattacgcccatacccccgacgcgttggaaaaagttctcacggccctg
cgtcctcacgccaagggcaagttgctgtgcctgttcggctgcggtggcgatcgtgatcgc
ggcaagcgtccgctgatggccgaggtggtggagcggctggcagacggcgtgctggtcacc
gacgacaaccctcgtaccgaagacccgcagcggattttcgacgacatccgcgccggtttt
atggctgtggataacgtcaccttcgtggctggtcgcggccaggctattgcccagttgatc
gccagtgcctcggcggacgatgtcatcgtcctggccggcaagggtcatgaggactatcag
gaaatcaacggcgaacgccatgctttctccgacctggtggaagccgatcatgccctgacc
gcgtgggaggtggcccatgcttaa
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