Pseudomonas bambusae: AAEO81_24250
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Entry
AAEO81_24250 CDS
T11347
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pbab Pseudomonas bambusae
Pathway
pbab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AAEO81_24250 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbab03400
]
AAEO81_24250 (nth)
Enzymes [BR:
pbab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AAEO81_24250 (nth)
DNA repair and recombination proteins [BR:
pbab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AAEO81_24250 (nth)
Prokaryotic type
AAEO81_24250 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WZO60603
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Position
5362461..5363099
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AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRLHEDNPDPKTELSYSSPFELLIAVILSAQATDVSVNKATARLYPVANT
PQGIYALGVEGLSDYIKTIGLYNSKAKNVIETCRMLVELHGGEVPQTREALEALPGVGRK
TANVVLNTAFRQLAMAVDTHIFRVSNRTGVAPGKNVVEVEHKLMKFVPKDYLLDAHHWLI
LHGRYVCVARKPRCGSCRIEDLCEYKAKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagcaaaacgtctggaaatcttccgccgtcttcacgaggacaatcctgatcct
aaaacggagttgtcctacagttctccctttgagttgctgattgcagtcattctctcggcg
caagcgactgacgtcagcgtcaataaggccacagcgcggctctacccggtcgccaacacc
cctcaaggcatttacgcgctaggggttgagggcctttcggactacatcaaaaccatcgga
ctctataacagcaaggcaaagaacgtgatcgagacctgccgcatgctggtcgagcttcat
ggcggcgaggtgccgcagacgcgtgaagcgttggaagctttgcctggcgtgggccgcaag
acggccaatgtggtgctcaatacggctttcaggcagttggcgatggcggttgatacgcat
attttccgagtgagcaaccggacaggcgttgcgcccggaaagaatgtcgttgaggtcgag
cataagctcatgaagtttgtgccgaaggactatctgctggacgcccatcactggctgatc
cttcacggccgatacgtgtgtgtggcgcgcaagcctcgttgcggcagttgtcggatcgag
gacctgtgcgaatacaaggcaaaaacctccgacgattga
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