Paenibacillus barcinonensis: HUB98_03575
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Entry
HUB98_03575 CDS
T06922
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac00270
Cysteine and methionine metabolism
pbac00450
Selenocompound metabolism
pbac00670
One carbon pool by folate
pbac01100
Metabolic pathways
pbac01110
Biosynthesis of secondary metabolites
pbac01230
Biosynthesis of amino acids
pbac04980
Cobalamin transport and metabolism
pbac04981
Folate transport and metabolism
Module
pbac_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HUB98_03575 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HUB98_03575 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HUB98_03575 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HUB98_03575 (metH)
04980 Cobalamin transport and metabolism
HUB98_03575 (metH)
Enzymes [BR:
pbac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
HUB98_03575 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S-methyl_trans
Met_synt_B12
Pterin_bind
B12-binding_2
B12-binding
MtrH
CdhD
Motif
Other DBs
NCBI-ProteinID:
QKS55486
LinkDB
All DBs
Position
complement(842718..846158)
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AA seq
1146 aa
AA seq
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MDKLSLHDALKQRILILDGAMGTMIQQEDLTSEDFGGEDLDGCNEMLVLTRPDLIQRIHE
DYLEAGADLIETNTFGATSVVLAEYDIQDRAREINLEAARIAKAAVDRFSTPESPRYVVG
AMGPTTKTLSVTGGVTFQELVASYFEQALALIEGGVDALLLETSQDTLNVKAGSIGIQQA
FDQSGIKLPLMISGTIEPMGTTLAGQNIESFYISLEHLNPISVGLNCATGPEFMRDHIRS
LSGMASVAVSCYPNAGLPDENGNYHESPDSLAQKIGAFAEQGWLNIAGGCCGTTPAHIRA
MRDMLAKYPPRELNGTHPPALSGIDPVYVEQDNRPYMVGERTNVLGSRKFKRLIVEGKYE
EASEIARAQVKNGAHIVDVCVQDPDREETEDMIKFLELVVKKVKVPLMIDTTDAAVIDTA
LQYSQGKAIINSINLEDGEEKFELVTPLLHKYGGAVVVGTIDERGQAISREDKLDVAKRS
YDLLVNKYGLKPEDIIFDTLVFPVGTGDEQYIGSAKETIEGIRIIKEAMPECHTILGISN
ISFGLPEAGREVLNSVFLYECTKAGLDYAIVNTEKLERYASIPEEERRLSEELLYNTNDD
TLAAFVAAFRNKKVEKKEKISNLSLEERLASYVVEGSKEGLLPDLEQALTKYSALEVING
PLMRGMEEVGRLFNNNELIVAEVLQSAEVMKASVAYLEQFMEKNETSVKGKIILATVKGD
VHDIGKNLVEIILSNNGYRIINLGIKVPPERIIEAYREEKVDAIGLSGLLVKSAQQMILT
AQDLRTAGIDVPIMVGGAALTRKFTKNRIRPEYNGMVVYAKDAMDGLDLANKLMNPVTRE
AMQAEMDAEKEADASSAGEVQALPELTRVERSEISADHPVLVPPDLERHTLRNYPLSHIL
PYVNMQMLLGHHLGLRGSVEQLLASGDPKATDLKAVVDGIMQEAVRDGIIQAHAMYRFFP
AQSSGNSIIIYDPQDTSNILHTFTFPRQKVEPFLCLSDFLKPVESGEMDYVGFLVVTAGH
GVRELSTAWKDQGDYLRSHALQSVALEVAEGLAERVHHMMRDIWGFPDPAEMTMKQRHGA
RYQGIRVSFGYPACPDLEDQGPLFKLMQPEDIGVELTEGFMMEPEASVSAMVFSHPQAKY
FNVEKA
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
ttggataagcttagtctacatgatgcattaaaacaacgaatattaatcctcgacggcgca
atggggacgatgattcaacaagaggatctgaccagcgaagatttcggcggtgaagatctg
gatggatgtaatgaaatgctggtgctgacacgcccggacttaatccaacgcatacatgag
gactatctggaggccggtgctgacctaatcgagaccaatacatttggcgcgacttctgtc
gtgcttgctgaatacgatattcaagatcgtgcacgcgagattaatctggaagcagcccga
attgcaaaagcagcggtggatcgtttttccacaccggagtcaccacgttatgttgtaggc
gcgatggggccaacgaccaaaacgttgtctgtgacgggaggcgtaacgttccaggagctg
gttgccagctatttcgagcaagcgcttgctttaatagagggaggcgttgatgcgctactg
cttgaaacctctcaggatacactcaatgttaaggcaggaagcattggcattcagcaagct
ttcgatcaaagtggcatcaagctgcctctgatgatctcgggaacgattgaaccgatgggc
acgactctggccggtcagaacattgaatccttttatatatccctagaacaccttaacccg
atttcggtgggtctaaactgtgcaactgggccggaattcatgcgtgaccatattcgttcc
ctgtctggtatggcatctgtagctgtgagctgttatcccaacgcaggtcttcctgatgaa
aatgggaattatcacgaatcgccagattcgctggcgcagaagatcggcgcttttgcagag
caaggctggctgaacattgcaggaggctgctgtggaacaacgccggcacatattcgagcc
atgcgtgacatgcttgcgaagtaccccccaagagaattgaacggaacacatccgccagca
ctgtccgggatcgacccggtgtatgttgagcaggacaatcgtccttatatggttggtgaa
cgtacgaatgttctgggctcacgtaagttcaaacggttgattgtcgaaggcaagtatgag
gaagcttcagagatcgccagggctcaggtgaaaaatggagcacacatcgttgacgtctgc
gtgcaggaccctgaccgtgaggaaacagaggatatgatcaagttccttgaacttgttgtc
aaaaaggtcaaggtgccgctcatgatagataccacagatgcggctgttattgatacagct
cttcaatattctcaagggaaggcgattattaactccattaaccttgaggatggggaagaa
aaattcgaactggtaaccccgttgctgcacaaatatggcggtgctgtagttgtcggaacc
attgacgagcgtggtcaggcgattagccgtgaggacaagctggacgtggcgaagcgttca
tatgacctgctggtaaacaaatatggcttgaagccggaggatattatttttgatacgctg
gtattcccggtaggaacaggagacgaacagtacatcggctctgccaaggaaaccattgaa
ggcattcggattattaaggaagccatgccggagtgccacacgattctcggaatcagtaac
atctcctttggtctgcccgaagcgggtcgcgaggtgttgaattccgtattcctgtacgaa
tgtaccaaggccggactggactatgctatcgtaaataccgaaaagctggagcgttatgca
tccattccagaggaagagcgcagactctcggaagagcttttatataacacaaacgatgat
acacttgccgcattcgtagcggcattccgcaacaaaaaggtggagaaaaaagagaaaata
tctaatctttcactggaagaacggcttgcatcctatgtggtggaaggcagcaaggaaggg
ttgctgcccgatctggagcaggctcttaccaaatattccgcgctcgaagtaatcaatggt
ccattgatgcgggggatggaggaagtcggtcgtctgttcaacaacaatgagttaattgta
gcagaggtgcttcagagtgcagaagtaatgaaggcttccgtagcgtatctggagcagttt
atggagaaaaatgaaacttccgtcaaaggaaagatcattctggctaccgttaaaggggac
gtacacgacatcggcaaaaacctggtggagatcatcttgtccaacaacggttaccggatc
attaatttgggtataaaagtaccaccagagcgtattatcgaggcttatcgggaagagaag
gtggatgccatcggcttgtcagggctgcttgttaaatcggctcaacagatgatactcacc
gctcaggatttgcgcacagctggcattgatgtgcctattatggtaggcggagcggcttta
acacgcaaatttacgaaaaaccgcattcgtcctgaatacaacggtatggttgtgtacgcg
aaggatgcaatggatggtctcgatctggcgaataagctgatgaatcctgttacgcgcgaa
gcgatgcaggccgagatggatgcagaaaaagaagccgatgcttctagcgcaggtgaagtt
caggcgctgcctgagcttactcgggtggagcgctcagagatctcggccgatcatccggtg
cttgtgccgcctgatctcgaacgccatacactgcgcaattatccgttgtctcatattctt
ccttatgtgaacatgcaaatgctgctgggacatcatctggggctgcgcggctcggttgag
caacttttagcttctggtgatcccaaggccactgaccttaaagcggtcgtggatggcatc
atgcaggaagcggttagagatggaattattcaggcgcatgcgatgtatcgtttcttcccg
gcgcagtcgagcggcaatagcatcatcatttatgatccgcaagatacaagcaatatcctg
catacctttacgttcccgcggcaaaaggtagagccgttcctgtgtttgtctgacttcctg
aagcctgttgaatccggtgaaatggattatgttggtttccttgtcgttactgcgggacat
ggcgtgcgcgagctttccacagcctggaaggatcaaggggactatcttcgctcacacgca
ttgcaatctgtagcgctcgaagtagcggaaggcttggcagaacgcgtgcatcatatgatg
agggatatctggggcttcccggacccggccgaaatgacaatgaagcagcgtcatggtgcg
cgttatcagggaattcgggtttccttcggttatccggcgtgcccggacctggaggatcag
ggtccgcttttcaagctgatgcagcctgaggatattggtgtagaattgacggaaggtttc
atgatggaaccggaagcatcggtgtctgcgatggtgttcagccatccgcaggccaaatat
tttaacgttgaaaaagcataa
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