Pseudomonas batumici: NUH87_22225
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Entry
NUH87_22225 CDS
T10437
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pbam Pseudomonas batumici
Pathway
pbam00300
Lysine biosynthesis
pbam00550
Peptidoglycan biosynthesis
pbam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NUH87_22225
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NUH87_22225
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbam01011
]
NUH87_22225
Enzymes [BR:
pbam01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
NUH87_22225
Peptidoglycan biosynthesis and degradation proteins [BR:
pbam01011
]
Precursor biosynthesis
Amino acid ligase
NUH87_22225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WVV60917
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Position
4876879..4878342
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AA seq
487 aa
AA seq
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MSLSLNKIFAHAGRDLLIRELALDSRKVRAGDLFLAVPGAKVDGRNHIADALQRGAAAVA
YEVEGATVLPITDVPLIPVKGLAAQLSDIAGRFYGDPSRQLNLVGVTGTNGKTSVSQLIA
QALDLLGQHCGILGTLGTGFHGALQSGMLTTPDPIAVQASLADLKKAGAKAVAMEVSSHG
LDQGRVTALAFDVAVFTNLSRDHLDYHGSMQAYGAAKAKLFNWADLSCRVINIDDEFGRK
LAAEKHESRLLTYSQEDPGAYLYCRESQFSDDGVRATLVTPQGEHHLRASLLGRFNLSNL
LAAVGALLGLDYPLDEILRVLPQLEGPAGRMQRLGGGARPLVVVDYAHTPDALEKVLLAL
RPHAKGRLLCLFGCGGDRDRGKRPLMAEVVERLADGVLVTDDNPRTEDPSRIFDDIRTGF
VAADKVRFVAGRGLAIAELIAGASVDDVIVLAGKGHEDYQEINGERHDFSDLVEATKALD
AWEAAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgagcctgaacaagatttttgcccacgccggtcgcgatctgctgattcgcgag
ctggcgctggacagccgcaaggtccgcgccggcgacctgttcctggcggtgccgggcgcc
aaggtcgacggtcgcaatcacattgccgacgccttgcagcgcggcgcggcggcggtcgcc
tatgaagtggaaggcgccaccgtgctgccgatcaccgatgtgccgctgatcccggtcaag
ggcctggccgcgcaactgtccgatatcgccgggcgtttctatggcgatccgagccgccag
ttgaacctggtgggcgtgaccggcaccaacggcaagaccagcgtcagccagttgattgcc
caggccctggatctgctgggccagcattgtggcattctcggcaccctcggcaccggcttc
cacggtgcgctgcagagcgggatgctgaccacgccggacccgattgccgtccaggcgagc
ctggccgacttgaagaaggccggggccaaggccgttgccatggaagtgtcttcccacggc
ctggaccagggccgggtgaccgcgctggcgttcgacgtggcggtgtttaccaacctgtcc
cgcgaccacctggattatcacggcagcatgcaagcctatggcgcggccaaggccaagctg
ttcaactgggccgacctgagctgccgcgtcatcaatatcgacgatgagttcggtcgcaaa
ctggccgctgaaaaacatgaatcgcgcctgctgacctacagccaggaagaccctggcgcc
tacctgtattgccgcgaaagccaattcagcgatgacggtgtgcgcgccacgctggtgacg
ccgcaaggcgagcatcacctgcgcgcgtcgctgctcgggcgcttcaacctgagcaatctg
ctggcggcggtcggtgccttgctgggcctggattacccgctggacgagatcctgcgggta
ctgccgcagctcgaaggaccggccggtcgtatgcaacgcctgggcggcggtgcccggcca
ttggtggtggtcgactacgcccacaccccggatgccctggaaaaagtcctgctggccctg
cgtccccacgccaagggccggttgctctgcctgttcggctgtggcggcgaccgtgatcgc
ggcaagcgcccgctgatggctgaagtggtcgagcgtctggccgatggcgtgctggtcacc
gatgacaaccctcgaactgaagacccttcgcggatcttcgacgatatccgcacgggcttc
gtggccgcggacaaagtccgtttcgtcgccggtcgcggcctggccatcgccgaactgatt
gccggtgcttcggtcgatgacgtgatcgtcctggccggcaaaggccatgaggactatcag
gaaatcaacggcgagcgccatgacttctccgatctggtcgaggccaccaaggccctggac
gcctgggaggctgcccatgcttga
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