Pseudomonas batumici: NUH87_25240
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Entry
NUH87_25240 CDS
T10437
Symbol
acnD
Name
(GenBank) Fe/S-dependent 2-methylisocitrate dehydratase AcnD
KO
K20455
2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:
4.2.1.117
]
Organism
pbam Pseudomonas batumici
Pathway
pbam00640
Propanoate metabolism
pbam01100
Metabolic pathways
pbam01120
Microbial metabolism in diverse environments
pbam01200
Carbon metabolism
Module
pbam_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NUH87_25240 (acnD)
Enzymes [BR:
pbam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.117 2-methylcitrate dehydratase (2-methyl-trans-aconitate-forming)
NUH87_25240 (acnD)
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
WVV61468
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Position
5522171..5524765
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AA seq
864 aa
AA seq
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MNSQYRKSLPGSHLDFFDARAAVDAIQPGAYDGLPYTSRVLAENLVRRCDPATLSDSLKQ
LIERKRDLDFPWFPARVVCHDILGQTALVDLAGLRDAIASQGGDPAQVNPVVPTQLIVDH
SLAVECGGFDPDAFTKNRAIEDRRNEDRFHFIDWTKKAFKNVDVIPPGNGIMHQINLEKM
SPVIQARDGVAFPDTCVGTDSHTPHVDALGVIAIGVGGLEAESVMLGRASWMRLPEIVGV
ELTGKLQAGITATDMVLALTEFLRKQKVVGAYLEFFGEGASALTLGDRATISNMAPEYGA
TAAMFYIDQQTIDYLKLTGREDEQVKLVETYARHTGLWADSLKGADYERGLSFDLSSVVR
NMAGPSNPHARVATRDLAAKGIAGQWTEVPGQMPDGAVIIAAITSCTNTSNPRNVIAAGL
LARNANKLGLTRKPWVKSSLAPGSKTVALYLDEAGLTDELEQLGFGVVAFACTTCNGMSG
ALDPVIQQEIIDRDLYATAVLSGNRNFDGRIHPYAKQAFLASPPLVVAYAIAGTIRFDIE
KDVLGLDAEGKEIRLKDIWPSDEEIDAVVKASVKPEQFRKVYIPMFAVHEDTGPKVTPLY
DWRPMSTYIRRPPYWEGALAGARPLKGMRPLAVLPDNITTDHLSPSNAIMLDSAAGEYLA
KMGLPEEDFNSYATHRGDHLTAQRATFANPKLFNEMVLENGKVKQGSLARVEPEGQVMRM
WEAIETYMERKQPLIIIAGADYGQGSSRDWAAKGVRLAGVEAIAAEGFERIHRTNLVGMG
VLPLEFKPGTDRKTLGIDGTETFDVVGERTPRATLTLVIQRQNGERVEVPVTCRLDTAEE
VSIYEAGGVLQRFAQDFLQSATAG
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaatagccaataccgcaaatcgctgcccggcagccacctggatttcttcgacgcccgt
gcggcggtcgatgccatccagcccggggcctacgacggcctgccttacacctcccgggtc
ctcgccgagaacctggtacggcgctgcgacccggcgacactgagcgattccctgaagcaa
ctgatcgagcgcaagcgcgacctggatttcccctggttcccggcccgcgtggtctgccat
gacatcctcggccagaccgccctggtggacctggccggcctgcgcgacgccatcgcctcc
cagggcggcgacccggcccaggtcaacccggtggtgccgacccaactgatcgtcgaccac
tccctggccgtggagtgcggcggcttcgacccggacgccttcaccaagaaccgcgccatc
gaagaccgccgcaacgaagaccgcttccacttcatcgactggaccaagaaggccttcaag
aacgtcgacgtgatcccgccgggcaacggcatcatgcaccagatcaacctggagaaaatg
tcgccggtgatccaggcgcgtgacggcgtggccttccccgacacctgtgtcggcaccgac
agccacacccctcacgtcgatgcgctgggggtgatcgccatcggtgtcggcggcctggaa
gccgagagcgtgatgctcggtcgggcgtcctggatgcgcctgccggaaatcgtcggcgtc
gagctgaccggcaagctgcaagcgggcatcaccgccaccgacatggtgctggcgctgacc
gagttcctgcgcaagcagaaagtggtcggggcgtacctggagttcttcggtgagggcgcc
tccgccctgaccctgggcgatcgcgcgaccatttccaacatggccccggaatacggcgcc
acggcggcgatgttctacatcgaccagcagaccatcgactacctgaaactcaccgggcgt
gaagacgagcaggtcaagctggtggaaacctacgcccggcacaccggtctctgggccgat
agcctgaaaggtgcggactacgagcggggactgagcttcgacctgtcctcggtggtgcgc
aacatggccggccccagcaacccccatgcccgcgttgccacccgcgacctggcggccaag
ggcattgccggccagtggacggaggtgccggggcagatgcccgacggcgcggtgatcatc
gctgccatcaccagttgcaccaacaccagcaacccgcgcaacgtcatcgccgccggcctg
ctggcacgcaacgcgaacaagctgggcctgacccgcaagccgtgggtcaagtcatcgctg
gcgccgggctccaagaccgtggcgctgtacctggacgaagccgggctgaccgacgagctg
gagcaactgggtttcggcgtcgtggcctttgcctgcaccacctgcaacggcatgtccggt
gcgctggatccggttatccagcaggaaatcatcgaccgcgacctctacgccaccgccgtg
ctgtcgggtaaccgcaacttcgacgggcgcatccatccgtacgccaagcaggccttcctg
gcctcgccgccgctggtggtggcctacgcgattgccggtaccatccgtttcgatatcgag
aaggacgtgctgggcctggacgccgagggcaaggaaatccgcctcaaggacatctggccg
agcgacgaggaaatcgacgcggtggtcaaggcctcggtgaagccggagcagttccgcaag
gtctacatcccgatgttcgccgtccacgaggacaccggtcccaaggtcacgccgctgtac
gactggcggccgatgagcacctacatccgtcgtccgccgtactgggaaggcgccctggcc
ggtgcgcggccgctcaagggcatgcgcccgctggcggtgctgccggacaacatcactacc
gatcacctgtcgccgtcgaacgccatcatgctcgatagcgcggccggcgagtacctggcg
aaaatgggcctgccggaagaggacttcaactcctacgcgactcaccggggtgaccatctc
accgcacaacgcgcgacgttcgccaacccgaaactgttcaacgaaatggtcctggaaaac
ggcaaggtcaagcagggttccctggcgcgggtcgagccggaaggccaggtcatgcgcatg
tgggaagccatcgagacctacatggagcgcaagcagccgctgatcatcatcgccggtgcc
gactacggccagggctcgtcccgtgactgggcggccaagggtgtgcgcctggccggggtc
gaggcgattgccgccgaaggcttcgagcgtatccaccgcaccaacctggtgggcatgggc
gtgttgccgctggagttcaagccggggaccgatcgcaagaccctcggcatcgacggtacc
gagaccttcgatgtggtcggtgagcgtacaccgcgggcgaccctgaccctggtgatccag
cgccagaacggcgagcgggtcgaggtgccagtgacctgccgcctggataccgccgaagaa
gtctcgatctacgaggccggtggtgtcttgcaacgctttgcccaggacttccttcaatcg
gccacggctggctag
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