Engelhardtia mirabilis: Pla133_07780
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Entry
Pla133_07780 CDS
T09909
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
pbap
Engelhardtia mirabilis
Pathway
pbap03030
DNA replication
pbap03410
Base excision repair
pbap03420
Nucleotide excision repair
pbap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pla133_07780 (ligA)
03410 Base excision repair
Pla133_07780 (ligA)
03420 Nucleotide excision repair
Pla133_07780 (ligA)
03430 Mismatch repair
Pla133_07780 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbap03032
]
Pla133_07780 (ligA)
03400 DNA repair and recombination proteins [BR:
pbap03400
]
Pla133_07780 (ligA)
Enzymes [BR:
pbap01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Pla133_07780 (ligA)
DNA replication proteins [BR:
pbap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Pla133_07780 (ligA)
DNA repair and recombination proteins [BR:
pbap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Pla133_07780 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pla133_07780 (ligA)
MMR (mismatch excision repair)
DNA ligase
Pla133_07780 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Pla133_07780 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
HHH
PTCB-BRCT
Nlig-Ia
DNA_ligase_ZBD
BRCT_2
HHH_3
HHH_8
MazE_antitoxin
Phage_cement
Motif
Other DBs
NCBI-ProteinID:
QDU65713
UniProt:
A0A518BFM1
LinkDB
All DBs
Position
999443..1001686
Genome browser
AA seq
747 aa
AA seq
DB search
MARRSTASSDSTSSGDSSGAPSGESSGPPSGDRTGDLFGDVPSRAAALREEIRRHDRLYY
LESAPVISDAEYDALFRELRELEQASPSLVSADSPTQRVGAPLPEGSGFEKVAHEVPMLS
IDSLFGDDEVRDFEEKILRYLKLESGAELAWSVEPKFDGVSAALTYVDGQLARALTRGDG
QVGEDVTANVRTVRNVPLSLDTGGAPAPTLLEVRGEMLIARAAFERFNLERAGRGETILA
NPRNATSGAIRRNDPAEVARYPLEFHVYGVARLEGAQFATHTELLAALRGWGLPDSGHAR
RVVGLDAAIAYHDELEARRFELPFEIDGVVAKLDDLALRERLGRTARSMRWQYAHKFAAM
EATTVLRAIEVQVGANGRLTPRAHLDPVEVLGVIVRHATLHNAEVAKELGARPGDRVFVR
RAGDVIPQVTGVAEAAKGRAPKGWKDELPESLVEHLDGGRTAPRAGVTWAWRSEFSMPDV
CPACGTAAVREGAYWRCPNRFECPPQLVGRLETLVGRSAFDIDALGTKKLAQLLEHGYLH
SPADVFHLQPEPLLELERWGQKSVENLFEELEKRRRIPFDRFLVALAIDEVGPATAKLLA
RNFRDLQALHAASEEELQHLDGIGPEMARKIRLWFEDERNQAFVARLLEGGVVVQPLGSA
AGSGELSGKRFVVTGTLESLSRAEAKQLIEDLGGQVVSTVSAKTDYLVVGEKPGTKAKKA
AELGIPCLEEAAFLALAGRERSGPPRD
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgatccactgcttcgagcgacagcacgtcatccggcgactcttccggcgcc
ccttcgggcgagtcctccggaccgccttcgggcgatcggaccggcgacctgttcggtgat
gtgccgtcccgcgcggccgcgctgcgcgaagagatccgtcgccacgaccgcctgtactac
ctcgagtcggcaccggtcatctcggacgccgagtacgacgccctgttccgtgagctgcgc
gagctggaacaggcgagtccatctcttgtctccgccgacagcccgacacagagagtcggt
gcgccgctccccgagggctcgggcttcgagaaggtcgcccacgaagtgccgatgctgtcg
atcgacagtctcttcggcgacgacgaggtgcgtgacttcgaagagaagatcctgcgctac
ctgaagctggagtccggcgcagagttggcctggtcggtggagcccaagttcgacggggtc
agcgccgccctgacttacgtcgacggccaactggcgcgggccttgacccgcggcgacggg
caggtcggggaagacgtaaccgccaacgtgcggacggttcgcaacgtcccgctgtcactc
gacaccggcggggcacctgcgcccacgctgctggaggtccgcggcgagatgttgatcgct
cgtgcggccttcgagcgcttcaacctcgagcgggccggacgtggcgagaccatcctggcg
aacccgcgcaatgcgacgtcgggggccatccgacgcaacgatcccgccgaggtggcgcgc
tacccgctcgaattccacgtctacggggtcgcgcggctggagggtgctcagttcgccacg
cataccgaactcctggcggccctgcggggctggggcctgccggattctggccacgcccgc
cgagtcgtcggactcgatgcggctatcgcctaccacgacgaactggaggctcggcggttc
gagctgcccttcgagatcgacggggtcgtcgccaagctcgacgacctcgccctgcgcgag
cggctcgggcgcaccgcgcgatcgatgcgatggcagtacgcgcacaagttcgcggcgatg
gaggcgacgacggtgctgcgcgcgatcgaggtccaggtcggggccaacggtcgcctgacg
ccgcgcgcgcacctggacccggtcgaggtcctcggtgtgatcgtgcgtcacgcgaccctg
cacaacgcggaagtggccaaggaactcggcgcgcgtcctggggaccgcgtcttcgtgcgc
cgcgcgggtgacgtgatcccgcaggtcaccggcgtggccgaggccgcgaaggggcgcgcg
cccaaggggtggaaggacgagctgcccgagtctctcgtcgagcatctcgacggcgggcgc
acggcgcctcgagcgggggtgacctgggcctggcggtcggagttttcgatgcccgacgtc
tgccctgcctgcggcaccgcggcggtgcgcgagggggcctattggcgctgcccgaatcgc
ttcgagtgtccgcctcagttggtcggtcgcctcgagaccttggtcgggcgcagcgccttc
gacatcgatgccctgggcacgaagaagctggctcaactgctcgagcacggctacctccac
tctccggcagacgtcttccacctgcagcccgagccactgctggagctggagcgttggggg
cagaagtcggtcgagaacctcttcgaggaactcgagaagcgccggcggattccgttcgat
cgattcctggtagcgctggccatcgacgaagtggggccggccaccgccaagctccttgcg
cgcaacttcagggacctccaggcactgcacgccgcaagcgaggaggagcttcagcacctc
gacggcatcggccccgagatggcccgcaagatccgtctgtggttcgaggacgaacgcaac
caggcctttgtcgcgcgcctgctcgagggtggcgtggtcgtccagcccttgggatcggca
gcgggatccggggaactctcaggcaagcgattcgtcgtgaccggaactctcgagtccctg
tcccgagccgaagccaagcagctgatcgaggacctggggggtcaggtcgtgtcgacggtc
agcgccaagaccgactacctggtggtgggggagaagcctggcaccaaggccaagaaggcc
gccgagctgggcatcccctgtctggaagaggccgccttcttggccctggcgggacgggaa
cgaagcgggcccccgagagactga
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