Pogonomyrmex barbatus (red harvester ant): 105422477
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Entry
105422477 CDS
T04903
Name
(RefSeq) TNF receptor-associated factor 6-A-like isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04013
MAPK signaling pathway - fly
pbar04120
Ubiquitin mediated proteolysis
pbar04140
Autophagy - animal
pbar04144
Endocytosis
pbar04214
Apoptosis - fly
pbar04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105422477
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
105422477
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105422477
04140 Autophagy - animal
105422477
09143 Cell growth and death
04214 Apoptosis - fly
105422477
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
105422477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pbar04131
]
105422477
04121 Ubiquitin system [BR:
pbar04121
]
105422477
Enzymes [BR:
pbar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105422477
Membrane trafficking [BR:
pbar04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
105422477
Ubiquitin system [BR:
pbar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
105422477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
U-box
zf-RING_2
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
zf-RING_6
zf-Nse
zf-ANAPC11
Prok-RING_4
zf-TRAF_2
Zn_Tnp_IS91
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
105422477
NCBI-ProteinID:
XP_011630156
UniProt:
A0A6I9VNE0
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MIMASSDKTKMPAKVAKESENCDDSIKGYVEPRFECPICLTWLRDPVLTSCGHKFCSQCI
YSWLEKEGACCPVDSQPLKSENLFPDLYTTREISQKRTSCIYQQFGCQVKLSPVDMETHI
TQCPNKRDLQVQNNNSAISVESKLWDPPLKNETQVTNKEEPSSDWQQLLKNLYERIVILE
QENRELSITVSNQKNQLAAMSLRNCNGVYIWRLKSFREKLEVMTNEPRKTFYYSPGFYTS
PNGYKICARFNISHEYPDHFALVLHIMKSENDDALEWPFNGTMYFMLVHPRDSEKNICEI
TSSEPKKEAFQKPTCELNKRGYGYQDFILIRDITEYLQHDTLIFRIEVYPMCLRYIKS
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgattatggcatcctcggataaaacaaagatgcccgccaaggttgctaaggaaagtgaa
aattgtgatgatagcatcaaaggttatgtagagcctagattcgagtgtcccatttgttta
acatggctacgtgatccagtactaacatcctgtggtcataagttctgttcacaatgcatt
tattcttggcttgagaaagaaggtgcttgctgtccagttgatagtcaacctttgaagtct
gagaatctttttccagatctttataccactagagaaatatctcaaaaacgtacaagttgt
atttatcagcaatttggttgtcaagtaaaattatctcctgtggatatggaaacgcatatc
actcaatgccctaataaacgagaccttcaagtacaaaataataatagtgcaatatctgtg
gaatcaaaattatgggatccacctttaaagaatgagacacaagttacaaataaagaagag
ccttcttctgattggcaacaattgctcaagaatctatatgaaaggatagtaattttggaa
caagaaaatcgcgagctctctataacagtgtcaaatcagaaaaatcagcttgcagctatg
agtctacgaaattgtaatggagtttatatatggagattaaaatcttttcgagaaaaactc
gaggttatgaccaatgagcctcgaaaaacgttttattatagtccaggtttttatacaagt
ccaaatgggtacaagatctgtgcgaggtttaatatttcacatgaataccctgatcatttt
gctttagttttacatattatgaaatcagaaaatgatgatgctttagagtggccatttaat
ggcacaatgtattttatgttagtacatccacgagattcagagaaaaatatctgcgaaata
acatcatcagaaccaaagaaagaggcgtttcaaaagcctacatgtgaattaaataaacgt
ggctatggttatcaagatttcatacttatacgtgatataaccgaatatctacagcatgat
actctaatttttagaattgaagtttatccaatgtgtttaagatatataaaatcctag
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integrated database retrieval system
