Pogonomyrmex barbatus (red harvester ant): 105434176
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Entry
105434176 CDS
T04903
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pbar04131
]
105434176
Membrane trafficking [BR:
pbar04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105434176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
dsrm_Ferlin
Ferlin_C
FerI
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
105434176
NCBI-ProteinID:
XP_011648109
LinkDB
All DBs
Position
Unknown
AA seq
1501 aa
AA seq
DB search
MPFKKFRPKFSIYQVCVTILEAKYLPQNANPLVVVKVGNRKRRTVVRQRTDNPIYNEYFV
FDFTCSLDNLLNTEITIAVYLRNFLRRLKFHGSISFEVATVWEQPDRQYYHKWAVLRDPK
DLTTGPKGYVKCNIMVNVKGEKVKVHPEIEDEDDIEGNLLLPIGGERLLFRQRARYIFVV
YRADGLPDMSSLCRKTDFENVNPYVQISFAGMKGSTSEAWQTYSPKFREAIIFKEMFPVL
CHRVRIAIKHRIDSCRTCIIAVYILNITKISNSGEYGNIRNLWSTEEYLLVGVLYDICLI
DRSRFGSKLISFELSLGNAGNQQFLHSQCAENNDSQTENALLEKRLNFESQSAPRTTGTL
DGKYNYVPLGSRKPCLYIKSWWPNFEWRMYNSNSLRYISDSLETKLEKLEALMSMENPIA
FETYNETIRILKTDCIHYLHILDTGRYKNEGGITKLDQHRVSLCHKTIEDILKRIKINGE
LPNNNYMRIAMIHAYQYLKKLRNICDDPQHSLPDVFIWMIAGSKRVAYSRLPAEQIVYSE
EATEMGRKCGRRLNLFPRNPDDENEPVEYSACKIEAFLWLGNAKYAAACWSAIPPGYEID
HSRNVDVFPKYIEYNQFSTFQLRAHIFQGRFEPGMDASGLLDSFIRIVFQGYTASTQVYL
GLKANFSLELEDKIYSIPPDIRPKMTNYRLEVIFWGVRDMRKIKCMPVRRPRIVMECAGV
HVKSEVMKNAKKFSNFEERHIMIELEMPELDIYYPSITIKAYDSRGFGCFKYAGICIIPN
IHVFLEQLITEEDYDAQIYESKFIHKFQLAKRQTSIIIRQSIDPFWDQTLIFPPIILHGT
KEYIKFLPPEVVIQPFQQDLYSTRELCGRSIAVPLVKLATETYSPPDFPPKLAWYKFQSQ
KDCTGSVLAAFELIENQIYSTELEMQPQFEGFQDRLRTFELWHGRKGETFEQVGDNYAGK
FKGYISIYRWPHPDNLPCKTRSGRDAANGLCNDYPPQEPVKLLVRLYVIKGINLQPKDPL
SGKSDPYLYVKLGKNSISDRKNYIPNQLNPTFGRMFEIEASFPQDYMLEIQVWDYDVTTA
DDLIGVTRIDIENRFYSRHRAHCGISNVYSASGYNAWRDRERPTQILELLCRKNNLPSPE
YGEREIKIGKKSFPFHIVIEREDDVNREECMALSVLHHWQDFPICGCALVPEHVERRPLF
NVKRPGLEQGKLEMWVDMFRIGQLPPKSAVNISPPKPEEYEIRVIVWNTEDVPLIESQFL
TGEKCSDIYVKGWILYEDYQKTDIHYNSLTGEGNFNWRFVFRVTYSKGENIMVVRRRMSV
FAKNEMEEKLPCKLRLQVWDSDHFSSDDFIGELTLDLSRMPRGSSNSKNCTLKLLEPQLP
TINLFKVTRTRAWWPFSRSVDAGRYIQAGKVELEISILKAEDADNQPVGKGRNPPQILPS
PRRPDTSFSWFRNPWKACWFVVCRYYKWRILCCFMCTLFVLLVACGIYAFPGYFVKRLLG
A
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcaagaaattcaggccgaagttctccatttatcaagtttgcgtaactatactc
gaagcaaagtacttgccgcaaaatgcgaatccgttggtcgtcgtcaaagttggaaatcgc
aagaggaggacagtggtacgccagaggactgataatcctatatacaacgagtactttgta
ttcgacttcacgtgcagtttggacaatctgttaaacacggaaatcacgatagcggtgtat
ctgcggaactttcttcggcgactaaagtttcatggaagcatttccttcgaagttgccaca
gtatgggaacaaccagatcgtcagtattatcataaatgggccgtattgagggacccaaag
gacttaacgacaggcccaaagggttacgtaaagtgcaatatcatggtaaacgtcaaaggt
gagaaggtaaaggtgcatccagagatagaagatgaagacgacatcgaagggaatctactg
ctacccatcggtggtgagagattgctcttcaggcaacgcgctcgatacatcttcgtcgtt
tatcgcgccgacggcctgcccgacatgagcagtttgtgcaggaagaccgatttcgagaac
gttaatccttacgtgcaaatatcgttcgctggaatgaagggatcgacgagtgaagcgtgg
caaacctactccccgaaattccgcgaggccattattttcaaggagatgttccccgttctc
tgccaccgtgtgagaattgctataaaacatcgtatcgacagttgccggacttgcattata
gcagtttatatcctgaatataacaaagatttcgaattccggagagtacggtaatattaga
aatctgtggtcgaccgaggagtatcttttggttggagtattgtatgatatatgtctgatt
gatcgttctcgatttggatcgaaattaattagtttcgaactgagtctggggaacgcagga
aatcaacaatttctacatagccaatgcgcagagaacaatgacagtcaaacagaaaatgca
ttgctagaaaagcgattgaacttcgagagtcagtcagctccgcgaacaaccggcacttta
gatggcaagtataattacgtgcctctgggatctagaaagccgtgtttgtacattaaatct
tggtggccaaatttcgaatggcggatgtacaacagtaacagtctccgctacatctccgat
tctttagagacaaaattggaaaaattagaggcgttgatgtctatggaaaatccaatagcc
ttcgaaacttataatgaaacaattcgcatattgaaaactgattgtatacattatttacac
atattggataccggcagatataaaaatgaaggtggaattaccaaactcgatcagcatcgc
gtgagcctgtgtcacaaaactattgaagacattcttaagagaatcaagattaacggggag
cttcctaataataactacatgagaatcgcgatgatacatgcgtatcaatatctaaaaaaa
ttgagaaacatttgcgatgatcctcagcatagtctcccggatgtttttatttggatgatc
gcaggctcgaagcgagtcgcatactcgcgacttcccgccgagcaaatcgtctattccgag
gaggcgacagaaatgggccggaaatgtggtaggcggttgaatttgtttcccaggaatccg
gacgacgaaaacgagcctgtcgaatatagcgcctgcaaaattgaggcatttttgtggctc
ggcaatgcgaaatatgccgctgcgtgttggagtgcgattccgccaggatacgagatcgac
catagtagaaacgtcgacgtttttccgaagtacatcgagtacaaccagttctcgacgttc
caattgcgagctcacatattccaaggccgctttgaacccggaatggacgcttccggtttg
ctggattcgttcatacgtattgtgtttcaaggctacacagcctccacgcaggtttatctt
ggccttaaggctaattttagccttgaattagaggacaagatttacagcatcccaccggat
atcagaccgaaaatgacaaactacaggctggaagtgatcttttggggcgtacgcgacatg
aggaagataaaatgtatgccggtacgaaggccgaggattgtaatggagtgcgctggagtg
cacgtcaagtcggaagtgatgaagaacgccaagaaattcagcaacttcgaggaacggcac
attatgattgagctggaaatgccggaactcgacatttactatccgagcatcaccataaag
gcttacgattcgcgcggatttggctgtttcaagtatgcagggatctgtattatccccaac
attcacgtgtttctggagcaattaataactgaagaggattatgacgcgcaaatatacgag
tcgaaattcatacataaatttcaactagcaaaacggcagacgtcaataataataagacaa
agtatagatccattttgggaccaaacgttaatttttcctccaattattttacatggtacc
aaagagtatattaaatttttaccacccgaagttgtcatacagccttttcaacaggattta
tatagcacgagagaactctgcggcagatctatcgcagtgccattagtaaaacttgccacg
gaaacttactcgccgcccgatttcccaccgaaattagcgtggtataaattccagtcgcaa
aaagattgcaccggttcagtcctcgctgctttcgagttgatagaaaatcagatctattcc
acggaattggagatgcagccgcaattcgagggctttcaagatcgactccgtacttttgaa
ttgtggcacggaagaaagggtgaaactttcgagcaagttggagataattacgctggcaaa
ttcaagggatatatttctatataccgatggccacatcctgacaatctcccatgcaaaacg
agaagcgggagagacgcggctaatggtctgtgcaacgattatccgcctcaagagcctgtt
aagctcctcgttagactctacgttataaagggcattaacttacagcctaaggatcccctc
agcggcaagtcagacccgtatctctacgtgaagttgggaaaaaattctatcagcgacagg
aagaattatatacccaatcaattgaaccctacgtttggccgcatgttcgagattgaggcg
agctttccacaggattatatgttagaaattcaagtgtgggattatgatgtcacgacggca
gatgatttgattggcgtgacgagaatcgacatcgaaaatcgtttttatagccggcaccga
gcgcactgcggaatttcaaacgtttacagcgccagtggttacaacgcttggagggaccgc
gagagaccgacgcagattctggagcttctctgcaggaagaacaatctgccatcaccggaa
tacggagaacgcgagattaagatcggcaagaagtcatttccctttcacatcgtaatcgaa
cgagaagacgacgtaaacagggaggaatgtatggctctaagcgtgcttcatcactggcaa
gattttcctatctgcggatgcgctctggtacctgagcacgtcgaaagacgaccacttttc
aacgttaagaggcccggactcgagcagggcaaacttgagatgtgggtcgatatgtttcga
atcggacaattgccaccgaagtcggcggtcaacatttctcccccaaaaccggaggaatat
gaaattcgtgtgatcgtttggaatacagaagacgtaccattaatcgaaagccaattcctt
actggagaaaagtgctccgatatttatgtcaaagggtggattttatacgaggattatcag
aagactgacatccactataactccctgactggtgagggtaacttcaattggagattcgta
tttcgtgtcacgtattcgaaaggcgagaacatcatggtagtccgtagaagaatgtcagtg
tttgcgaaaaacgagatggaggaaaagttgccttgcaaactgcgtttacaagtttgggat
agtgatcatttttcctcggatgattttattggagagttgacacttgacttgtccagaatg
ccacgaggcagttcaaactccaaaaactgtacgctgaaattactcgaaccgcaattacct
acaataaatttatttaaagttacacggaccagagcttggtggcctttttctcgtagcgtt
gacgccggtagatatattcaagcgggtaaagttgagctggaaatatctatcttaaaagca
gaagatgcagataatcaaccggtaggaaaaggacggaatccacctcaaattcttccttct
ccaagacgacctgatacttctttctcctggtttcgcaacccgtggaaggcatgctggttc
gtcgtttgtcgttattataaatggcgaatattatgctgttttatgtgtactctattcgtg
cttttagtagcatgtggcatttacgctttccccggatattttgttaaacgtctcttgggc
gcttag
DBGET
integrated database retrieval system
