Thiopseudomonas alkaliphila: AKN87_00320
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Entry
AKN87_00320 CDS
T04152
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pbb
Thiopseudomonas alkaliphila
Pathway
pbb00300
Lysine biosynthesis
pbb00550
Peptidoglycan biosynthesis
pbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AKN87_00320
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AKN87_00320
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbb01011
]
AKN87_00320
Enzymes [BR:
pbb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AKN87_00320
Peptidoglycan biosynthesis and degradation proteins [BR:
pbb01011
]
Precursor biosynthesis
Amino acid ligase
AKN87_00320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AKX43730
LinkDB
All DBs
Position
67182..68651
Genome browser
AA seq
489 aa
AA seq
DB search
MPMLLKQLLPQAGSDLLIRELTLDSRKVLPGDLFLAVPGLLSDGRDYIAQAIKQGAAAVA
YEALDAPKMQDSEAQLIAVENLQPQLSALAATFYGEPSRSLEMVGVTGTNGKSTVTQLLA
QATTKLGQPCAVIGTLGVGFFGDLQESTHTTPDPIAVQAGLAKLKAQGARAVAMEVSSHA
LDQGRVTAVEFDVAVFTNLTRDHLDYHGDMQSYAAAKAQLFHWRSLQAAVINQDDALGRQ
LLAEVKTAKCYSYSCEDPSATVFAKNVRFSHLGIQAEIVTPHGEGVLRSPLLGAFNLSNL
LAVIATLLVQGRSLSEILQVLPLLQAPLGRMQRFGGEQQPLVVVDYAHTPDALAQVLKAL
RVHVSPPHQLICVVGCGGNRDTGKRPLMAQTAAKLADQVIITDDNPRLEDPAVIRQQMLA
GITELTKAQEVSPRASAIAAAVQQAASGDVVLIAGKGHENYQDINGIKHPYSDLEQAQLQ
LAEWEVKHV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgttactgaaacagttgctgccacaagcgggtagtgacttactcattcgagag
ttaacacttgatagccgtaaagttttgcctggagacttatttcttgctgttccaggctta
ttaagtgatgggcgagactatatcgcccaagcgattaagcaaggtgcagcagcagtggct
tatgaagcgctagatgcaccaaagatgcaagacagtgaagcgcagttaattgcggtagag
aacttgcagccacaactgtcagccttagctgctaccttttatggtgagccaagccgtagt
ctagaaatggttggggtaactgggactaacggtaaaagtaccgtcactcagttacttgct
caagccacgactaagttaggtcagccctgtgcggtgattggcaccttgggtgttggtttt
tttggtgacttgcaagaatccacgcacaccacgccagaccctattgcagtacaagcgggc
ttagctaaattaaaagcacagggcgcccgtgcggtagcgatggaggtgtcttcccatgca
ttggatcaggggcgagtaactgctgttgaatttgatgtggcagtgtttactaatctgacg
cgagatcacttggactaccacggtgatatgcaaagttatgccgctgctaaggcacagctc
tttcattggcggagtttgcaggccgcagtaattaatcaagacgatgcgttaggtcgtcag
ttattagctgaagttaagactgctaagtgctacagctacagttgtgaagaccctagcgcg
acggtatttgctaaaaatgtgcgctttagccatttaggaattcaggccgagattgtaacg
ccccatggtgagggtgtgctgcgtagcccgctattgggtgcatttaacctcagtaattta
ttggcggtgattgctaccttgttggttcaaggccgctcattgtcagagattttacaggtg
ttgcctttattgcaagcaccacttgggcggatgcagcgttttggcggcgagcagcaaccg
ttagtggtggtggattatgcccacacgcccgatgccctagctcaggttcttaaagcatta
cgggtgcatgttagtccgccgcatcaattgatctgtgtggtgggctgtggcggcaatcgg
gataccggtaagcggccactgatggcacagaccgcagcaaagctagccgatcaagttatc
attaccgatgacaatccacgtttagaagatcccgcggtgattagacagcaaatgttggct
ggtataactgaacttactaaggcacaagaggtctctccgcgggcaagtgcgatagccgct
gcagtccaacaggccgcttcaggtgatgtggtgttgattgcgggaaagggacatgaaaat
tatcaggatattaacggcattaagcatccatattctgatttagagcaagcgcaattacag
cttgctgagtgggaagttaaacatgtttaa
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