Thiopseudomonas alkaliphila: AKN87_03860
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Entry
AKN87_03860 CDS
T04152
Name
(GenBank) antibiotic transporter
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pbb
Thiopseudomonas alkaliphila
Pathway
pbb01501
beta-Lactam resistance
pbb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pbb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AKN87_03860
01503 Cationic antimicrobial peptide (CAMP) resistance
AKN87_03860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbb03036
]
AKN87_03860
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbb02000
]
AKN87_03860
01504 Antimicrobial resistance genes [BR:
pbb01504
]
AKN87_03860
Chromosome and associated proteins [BR:
pbb03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
AKN87_03860
Transporters [BR:
pbb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AKN87_03860
Antimicrobial resistance genes [BR:
pbb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AKN87_03860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
BSH_CzcB
Beta-barrel_RND_2
BSH_CusB
HH_CzcB
HH_YBHG
HH_EMRA
BSH_YhbJ
YknX_C
Motif
Other DBs
NCBI-ProteinID:
AKX44324
LinkDB
All DBs
Position
796716..797864
Genome browser
AA seq
382 aa
AA seq
DB search
MKCTFLRPALKLSSLACAVVLLTACNEQEANTTSQQQPPPKVGFVTLEAQPYTLTTELPG
RTAAYRIAEVRPQVTGIIQKRLFTEGTDIKAGDQLYQIDPAIYQANLKSAEANQIATRSL
ATRYKRLVDERAVSRQQYDDAHSAHLQAQAALEKAKIDLQYTQVKAPISGRIGRSSVTEG
ALVNNGQAQELAIIQQLDPIYVDVTQSSVELLRLREELRQGTLEKASDNAAKVTLQLENG
AIYEHEGKLEFSEVSVEPSTGAVTLRAVFPNPEQILLPGMYVRAQLVTGEQKHAILAPQQ
GITRNPRGEPIAMVLNADNEVEVRTLKTERTAGNKWLVNEGLQAGDRLITEGLQFIQPGV
KTDPHPATNVQSSEPASAATAN
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgcacctttttacgccccgctttaaagctgtctagcttagcctgcgctgttgtt
ctgctcacagcctgtaatgaacaagaagcaaacaccaccagtcagcaacagcctccacct
aaagtcggtttcgttacccttgaggctcaaccctatacccttaccaccgaactgccaggt
cgcactgcggcttaccgcatcgctgaagtgcgcccacaggtcactggaattattcaaaag
cgcctgtttactgaaggcacagacattaaagctggcgatcagctgtatcaaattgatcct
gcgatctatcaagccaacttaaaaagtgctgaagccaatcaaattgccacgcgctcactg
gccacccgctacaaacgcttagttgatgaacgtgcagttagccgtcaacaatacgacgac
gcccactcagcgcacctgcaagcacaagcggccttagaaaaagccaaaattgatctgcag
tacacccaagtcaaagcccctatttctgggcgcattggtcgctcaagcgtgactgaaggc
gccttagtcaataatggccaggctcaagaattagcgattatccaacaactggatccgatc
tatgttgacgttactcaatcttccgtagagttactgcgtcttcgcgaagaattacgtcaa
ggcaccttagaaaaagcctcagacaatgctgccaaagtgacgttacagctggaaaatggc
gccatctatgagcacgagggcaagttagagttctctgaagtgtcggttgaaccaagcacc
ggtgccgtcactttgcgtgcagttttccctaacccagagcaaattttactgccaggtatg
tatgtgcgggcacagttggtaactggcgagcaaaagcacgctattttagccccacaacaa
ggcattacccgcaaccctcggggtgagccaattgccatggtgctcaatgctgacaatgaa
gtggaagttcgtactttaaaaaccgagcgcaccgcaggtaacaagtggctggtcaatgaa
ggcttacaagccggggatcgtttgattacagaaggtctgcagtttattcagcctggtgtt
aaaaccgatccgcaccccgccaccaacgtccaaagcagtgagccggcctcagctgccacg
gctaattag
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