Pseudomonas brassicacearum DF41: CD58_12390
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Entry
CD58_12390 CDS
T03174
Name
(GenBank) conjugal transfer protein TraR
KO
K06204
RNA polymerase-binding transcription factor
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
CD58_12390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbc03000
]
CD58_12390
03021 Transcription machinery [BR:
pbc03021
]
CD58_12390
03009 Ribosome biogenesis [BR:
pbc03009
]
CD58_12390
Transcription factors [BR:
pbc03000
]
Prokaryotic type
Other transcription factors
Others
CD58_12390
Transcription machinery [BR:
pbc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
CD58_12390
Ribosome biogenesis [BR:
pbc03009
]
Prokaryotic type
rRNA transcription factors
CD58_12390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-dskA_traR
DksA_N
DUF8103
Motif
Other DBs
NCBI-ProteinID:
AHL33645
LinkDB
All DBs
Position
2720575..2720979
Genome browser
AA seq
134 aa
AA seq
DB search
MTKEKLLAMPADDYMNAEQLAFFTKLLQNMKVETHERIEQNRIAIESLDTPADPADAASV
EEERTWLVNAIDRDQRMLPQLEQALDRINDDSFGWCDDSGEAIGLKRLLISPTTKYCIEA
QERHEQIDKHQRQA
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggaaaagttgctggccatgccggcggatgactacatgaatgccgagcagctg
gctttcttcaccaagctgttgcagaacatgaaagtcgaaacccacgagcgcatcgaacag
aaccgaatcgccattgagagcctggacaccccggctgacccagcggacgctgcttccgta
gaagaagagcgtacctggctggtcaacgccattgatcgcgaccagcgcatgctgcctcaa
ctggagcaggccctggaccgtatcaacgatgacagctttggctggtgcgacgacagcggc
gaggccattggcctcaagcgcctgctgatcagcccgaccaccaagtactgcatcgaagcc
caggaacgtcacgagcagatcgacaagcaccagcgtcaggcttga
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