Podospora bellae-mahoneyi: QC761_706470
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Entry
QC761_706470 CDS
T09795
Symbol
LIG4
Name
(RefSeq) DNA ligase (ATP)
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pbel
Podospora bellae-mahoneyi
Pathway
pbel03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pbel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
QC761_706470 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbel03400
]
QC761_706470 (LIG4)
Enzymes [BR:
pbel01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
QC761_706470 (LIG4)
DNA repair and recombination proteins [BR:
pbel03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
QC761_706470 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
DNA_ligase_IV
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
87901681
NCBI-ProteinID:
XP_062728213
LinkDB
All DBs
Position
7:1542245..1545789
Genome browser
AA seq
1062 aa
AA seq
DB search
MALQRRRDHRQGPDVEAVEEDEAQYGRGGMSLEEVDQHFPHRPKNAHKTLPFAELYKSLF
NPLMDCKPGSSATAGAAAAAVPGKTRFGKAKKKTGGVNYHEQRRHIIERFMSRWRKEVGD
DFYPAMRLILPDKDRDRGVYGLKESGIGKMLVRVMKIGRDSEDGYSLLHWKLPGGGGGGN
QRFGAKGQTGTAGDFAGRVLEVVGKRAMRGTPGGWTIGEVNVLLDRLAGANGEGEQLPIF
EDIYRNCCAEEVMWLVRIILKDMRVGATERTFLGLWHPDAEALFSVSSSLRRVCWELWDP
ETRLEQKETGVSLMQCFQPQLAQFQMTTGFGKLVQNLGVTEEEKEFWIEEKLDGERMQMH
MKEDETVPGGFRFAFWSRKAKDYTYLYGEGLEDDNSALTRHLKNAFHDGVRELILDGEMI
TWDPEIDKIVPFGTLKTAALDQQKNPFQNGPRPLYRVFDILLLNKKPLADYTLRDRHAAL
EAAVRGEHRRLEIHPYESATTPDAIEPFLRKVVAEASEGLILKNPRSRYQLNSRNNDWIK
VKPEYMSEYGESLDCVIIGSYFGSGRRGGILSSFLCGVRVSENHVRSGAALTREKCLSFC
KVGGGLKAEDYAEIRHHTEGKWQDWQASNPPTDYIELAGGKMQYEKPDVWIRPSESVVIS
IKAASIGPSDQFAMGWTLRFPRFRKLRLDKSWDEGMDASDFVLLKDKVKEEEKERKAMEM
ESRKRKPAKRLKKDLVIAGTDPNAAPVEFADGGDNIKAESMSQVAFPPPQARRKSDKQLF
QGLDFCVLSEAIKPRKMSKPDLEKLIKEHGGRIHQQVDKGGNMILLAEKNVVRVASLKRA
GDADIVKPKWVFDCLAQNNGEGYLLPFEEGHLFHATEEMVKLAAENTDQYGDSYVRDVTP
DELRDIIDDMRIKGGVKEEEDAFHDQRTGEFDAEHFLDQLEERGRGLEGLKSFLFRRCRV
YFPVAAKEEEEEKRGPSSTELKAVKLQNEVKFGSGTVVGGLDDKEITHVVVVGGGEKQRK
ELAASVRYEVSSRRHVPRIVTGRWVEDCVKEGTLVDEEGYAP
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgcagagaagacgagatcaccggcagggtcccgacgtggaggctgtcgaggag
gacgaggcgcagtatgggaggggtgggatgagcttggaggaagttgatcagcatttcccc
caccgcccgaaaaacgcgcacaagacgctgccgtttgcggagctgtacaagtcgttgttt
aacccgcttatggactgcaagcccgggtcgtctgctactgctggtgcagcagctgctgct
gtcccggggaaaacaagatttggaaaggcgaagaagaagacgggcggggtgaactaccac
gagcagagaaggcacatcatcgagcggttcatgagccggtggaggaaggaggtgggtgat
gacttctaccctgccatgaggctgatcctgcctgacaaggatcgggacaggggggtgtac
gggttgaaggagagcgggattgggaagatgctggtgagggtgatgaagattgggagggat
agcgaggatgggtattctttgcttcattggaagcttccggggggtggtgggggggggaat
cagaggtttggggcgaaggggcagacaggaacggcgggggattttgcgggacgggtgctg
gaggttgttgggaagagggctatgagggggacgccgggggggtggacgattggggaggtt
aatgttttgttggatcggttggctggggctaatggggagggggagcagctgccgattttt
gaggatatttacaggaattgctgtgcggaggaggtgatgtggctggtgaggattatactg
aaggatatgagggtgggcgcgacggaaaggacgtttttggggctgtggcatccggatgcg
gaggcgttgtttagcgtttcgagtagtttgaggagggtttgctgggagttgtgggatccg
gagactaggttggagcagaaggaaaccggggtgagcttgatgcagtgttttcagccgcaa
ctggcgcagtttcagatgacgacggggtttgggaagctggtgcagaatctgggggttacc
gaggaggagaaggagttttggattgaggagaagctggatggggagaggatgcagatgcat
atgaaggaggatgagacggtgcccggagggtttaggtttgcgttttggtccaggaaggcg
aaggattacacgtatttgtatggggaggggttggaggatgataactcggcgttgacgagg
catttgaagaacgcgtttcatgacggggtgagggagttgattttggatggagagatgatt
acgtgggatccggaaatcgacaagattgtgccgtttggcacgctcaagacggcggcgctg
gatcagcagaagaatccgtttcagaacgggcctcgacctctgtatcgggtctttgatatt
cttcttctgaacaagaagcctctggcggactacaccctccgggaccgccacgctgcccta
gaggcagccgtcaggggcgagcatcgccgtctcgagattcacccctacgaatcagccaca
acaccagacgccatcgagcccttcctccgcaaagtcgtcgccgaagcctcggaaggtctc
atcctcaagaacccgcgctctcgctaccagctcaacagccgcaacaacgactggatcaaa
gtcaaacccgagtacatgtccgagtatggcgagtccctcgattgcgtcatcatcggcagc
tacttcggctccggccgtcgcggaggcatcctctccagcttcctctgcggcgttcgtgtc
agcgagaaccacgtcaggtccggcgctgccctcaccagagagaagtgtttgagcttttgc
aaagtaggtggcggcctcaaagcagaagactacgccgagatcagacaccacaccgagggc
aaatggcaagactggcaagcgagcaacccgcccacggactacatcgagctcgcgggaggg
aaaatgcaatacgaaaaaccagatgtatggatccgacctagtgagtcggttgtcatctcc
atcaaggcagcctccatcggcccctccgaccagttcgccatgggctggactctacgcttc
cctcggttccgtaagctgagactggacaaatcgtgggacgagggcatggacgcgagcgat
tttgttcttctcaaagacaaagtcaaggaagaagagaaggagcgaaaggcgatggagatg
gagagcagaaagcgcaagccagcaaagaggttgaagaaggacttggtcatcgcggggacg
gatccgaatgctgcgccggttgagttcgccgacgggggggataatatcaaggccgaatcg
atgagccaggttgcgtttcccccccctcaggctagaaggaagtccgacaagcaactgttc
cagggactggacttttgtgtattgtctgaggcaatcaaaccccgcaagatgtccaagcct
gatctggaaaagttgatcaaggagcatggagggaggattcatcagcaagtcgacaagggc
gggaacatgatcctcctcgcggagaagaacgtcgtccgggtggcgtcgctgaaacgggcc
ggtgacgcggatattgtcaagcccaaatgggtctttgactgccttgcgcagaataatgga
gagggctatctcctcccgtttgaggaggggcacttgtttcatgccacggaggagatggtg
aagttggcggcggagaatacggatcagtatggggattcgtatgtcagggatgttacccct
gatgagctgagggatatcattgacgacatgcgcatcaaagggggtgttaaagaggaggag
gatgcgtttcatgatcagaggacgggggagtttgatgctgagcactttttggatcagctg
gaggagcgagggaggggtttggaggggttgaagagtttcttgtttagacggtgtagggtt
tacttccctgttgcggcgaaggaggaggaggaggagaagagggggccttcgagtacggag
ttgaaggcggtgaagctgcagaatgaggtcaagtttgggagcgggactgtggtggggggt
ctggatgataaggagatcacgcatgtggtggtggtcgggggtggggagaaacagaggaag
gagctggcagcgagcgtgaggtatgaggttagttcgaggagacatgtgccgaggattgtg
acggggaggtgggtagaggattgtgtgaaggaggggacgttggttgatgaagagggatat
gccccttga
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