Pseudomonas benzopyrenica: V6W80_06800
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Entry
V6W80_06800 CDS
T10550
Name
(GenBank) NAD-glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
pben Pseudomonas benzopyrenica
Pathway
pben00220
Arginine biosynthesis
pben00250
Alanine, aspartate and glutamate metabolism
pben00430
Taurine and hypotaurine metabolism
pben00910
Nitrogen metabolism
pben01100
Metabolic pathways
pben01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
V6W80_06800
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
V6W80_06800
00220 Arginine biosynthesis
V6W80_06800
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
V6W80_06800
Enzymes [BR:
pben01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
V6W80_06800
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
ELFV_dehydrog
C2c1_Nuc-II
Motif
Other DBs
NCBI-ProteinID:
WWM67985
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All DBs
Position
1478697..1483544
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AA seq
1615 aa
AA seq
DB search
MAFFTAASQADFQQQLKNALAAHVEGDTLEQLDRFTAQFFGIVPLEELTQRRLSDLVGCV
LSAWRLLDVFDPAEPRVQVFNPDYERHGWQSSHTVVEVLHADSPFLVDSVRMELNRQGYS
VHTLQNSVLSVRRDAQGRLLELLPKGQQGEGVTREALMFLEIDRCAATSELRALEAALQE
ILGEVRLTVGDFAAMKAKVGDLLTWLDRRPAGVEEGELAEVKAFLDWLRNDRFTFLGYEE
FTVEGDGETAVQRYVPDSLLGLSRRLRGRPETAEISLSGDPLRYLREPVLLSFAKAADPS
RVHRPAYPDFVSLREVDANGRVVREHRFMGLYTSSVYNDSVREIPYIRRKVDEVRRRADF
DSSAHLGKELAQVLEGLPRDDLFQTPVDDLFSTAMAIVQIQERSKVRVFLRRDPYGQFFY
CLAYVPRDIYSTEVRQRMQQILMDRLHGTDCEFWTFFSESVLARVQFILRVDPLQPQDVD
PARLEQEMVQACRSWKDDFASLMVDSFGEAQGTSILADYPLGFPAGYRERFAPHLAVVDM
RHLLALKDDRRLAMGFYQPLTQTGDNILHCKLYHADTPLALSDVLPILENLGLRVLGEFP
YELRHRNGRRYWIHDFAFTTVAGLELDLQQLNDTFQDAFVQVVEGQAENDSFNRLVLTAG
LPWRDVAVLRAYARYLKQIRIGFDIGYIAATLNAHVDIARELVRLFRMKFYLARRMTSED
LDDKQQRLEQAILSALDDVAVLNEDRILRRYLDLIKATLRTNVFQTDAAGKPKAYFSFKL
DPKAIPELPRPVPRYEIFVYSPRVEGVHLRFGNVARGGLRWSDREEDYRTEVLGLVKAQQ
VKNSVIVPVGAKGGFVPRRLPTGGSRDEIQAEAIACYRIFISGLLDITDNLKDGEVVPPA
AVVRYDGDDPYLVVAADKGTATFSDIANGIAQDYGFWLDDAFASGGSAGYDHKKMGITSR
GAWVSVQRHFRERGIDVQTDPVTVVGIGDMAGDVFGNGLLRSRSLELVAAFNHLHIFIDP
NPDAERSYVERERLFNLPRSSWTDYDASLISQGGGIFPRSAKRIAISPEMKARFDLTADH
LTPNELINALLKAPVDLIWNGGIGTYVKASFETHADIGDKANDGLRVDGCDLRAKVIGEG
GNLGMSQLARVEFGLHGGACNTDFIDNAGGVDCSDHEVNIKILLGDVVSAGDMTVKQRNT
LMGEMTDEVGELVVANNYMQTGALSLAEYRARTHLAEYQRLIVDLEGRGKLDRTLEFLPS
DEVLAERAAKEQGLTRAELSVLISYSKIDLKEQLLASSVPDDDYLARDMQGAFPQRLTEQ
FPEAMARHRLKREIVANQIANDLINHMGITFVQRLCESTGMSAADVARAYVVMRDVLHLP
HWWRQVEALDHQVPADLQLRLMSELMRLGRRATRWFLRSHRSGLDAGAVAAFFGPRIAAL
GVRLDELLQGEPRQDWEERFRAYTEAGVPELLARVVAGTNHIYTLLPVIQAAEVTAQDPL
AVAATWFAAGDVLDLAWYQQQLNQLPVANAWQALAREAFRDEVDVQQRTITVAMLNLSEA
PSDPEARLSLWLERHRAAVERWRGLLVDLRNASGQDYAMYSVASRELADLASSSV
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttttcaccgctgccagccaagcggatttccaacaacaactcaagaatgccctc
gcggcccatgtcgaaggggataccctcgaacagctggatcgcttcaccgcccagttcttc
ggcatcgtcccgctagaagaactcacccaacgtcggctgtccgatctggtcggttgcgtg
ctgtcggcctggcgcctgctggacgtcttcgatccggccgagccgcgggtgcaggtcttc
aatccggattacgagcgacacggctggcaatcgagccacactgtggtcgaggtactgcac
gccgattcgccgttcctggtggactcggtgcgcatggaactcaatcgccagggctacagt
gtccataccctgcagaacagcgttctcagcgtccgtcgagatgcccagggtcgtctgctc
gagctgctgcccaagggccagcagggcgaaggagtgacccgcgaagccctgatgttcctt
gagatcgaccgctgcgcggcaaccagcgagttgcgcgccttggaggcagcgctgcaggag
atcctcggcgaggtccgcctgaccgtgggtgacttcgccgccatgaaggctaaggtcggc
gacctgctgacctggctggatcggcgtccggcgggcgtggaggagggggagctggccgag
gtcaaggccttcctcgactggctgcgcaacgacagattcaccttcctcggctacgaggaa
ttcaccgtcgaaggcgatggcgagaccgcggtgcaacgctatgtgcccgactccctgctg
gggctgtcgcggcgcctgcgcggccgtcccgagacggccgagatcagcctgtccggtgat
ccgctgcgttacctgcgcgagccggtgctactgtcctttgccaaggcggccgacccgagc
cgggtgcatcgtccggcctatcccgatttcgtctccctgcgcgaggtggacgccaatggc
cgggtggtgcgcgagcatcgcttcatgggcctctatacctccagcgtctacaacgacagc
gtgcgcgagatcccctatatccgccgcaaggtggacgaggtgcgccgccgcgccgatttc
gacagcagcgcccatttgggcaaggaactggcgcaggtgctcgaaggcctgccgcgggac
gatctgttccagaccccggtggacgatctcttcagcaccgccatggccatcgtgcagatc
caggaacgcagcaaggtgcgcgtcttcctgcgccgcgatccctatggccagttcttctat
tgcctggcctatgtgccgcgcgacatctactccaccgaagtccgccagcgcatgcagcag
atcctcatggatcgcctgcacggcaccgactgcgaattctggaccttcttctccgaatcc
gtgctggcgcgggtgcagttcatcctgcgcgtcgatcccctgcagccccaggatgtcgat
ccggcgcgcctggagcaggagatggtgcaggcctgccgcagctggaaggacgatttcgcc
agcctgatggtggacagcttcggcgaagcccagggcacctccatcctggccgattacccg
ctgggtttcccggccggctaccgcgagcgcttcgcgccgcacctggccgtggtggacatg
cggcacctgctggccctgaaggacgatcgccgtctggccatgggcttctaccagccgctg
acccagaccggcgacaacattctgcactgcaagctctaccacgccgacacgcccctggcg
ctgtcggacgtcttgccgatcctggaaaatctcggcctgcgcgtgctcggcgaattcccc
tacgagctgcgtcatcgcaatggccgccgctactggatccatgacttcgccttcaccacc
gtggccggcctcgagctggatctgcagcaactcaacgacaccttccaggatgccttcgtc
caggtggtggaaggccaggcggaaaacgacagcttcaatcgcctggtgttgaccgccggg
ctgccctggcgcgacgtcgcggtgctgcgcgcctatgcgcgctatctcaagcagattcgc
atcggcttcgacatcggctacatcgccgccaccctcaacgcccatgtcgatatcgcccgg
gagctggtgcggctgttccgcatgaagttctatctggcgcggcgcatgaccagcgaagac
ctggacgacaagcagcagcggctggagcaggccatcctcagcgccctcgacgacgtcgcg
gtgctcaacgaagaccgcatcctgcgacgctatctggacctgatcaaggcgaccctgaga
accaacgtgttccagaccgatgccgccggcaaacccaaggcctacttcagcttcaagctc
gatcccaaggccattcccgagttgccgcgcccggtgccgcgctacgagatcttcgtctac
agcccacgcgtggaaggggtacacctccgcttcggcaacgtcgcccgtggtggcctgcgc
tggtcggatcgcgaggaagactaccgcaccgaggtgctgggcctggtcaaggcgcagcag
gtcaagaattctgtgatcgtgcccgtgggcgccaagggtggcttcgtgccgcgccggcta
cccaccggtggctcccgtgatgagatccaggccgaggccatcgcctgctaccgcatcttc
atcagcggtctgctagacatcaccgacaatctcaaggatggcgaggtggtgccgccggcc
gcggtggtgcgctacgacggcgacgatccctatctggtggtggcggccgacaagggcacc
gcgaccttctccgacatcgccaacggcatcgcccaggactatggtttctggctcgacgat
gccttcgcctccggtggttcggcgggttacgaccacaagaagatgggcatcacctcccgg
ggtgcctgggtcagcgtgcagcgtcacttccgtgagcgcggcatcgatgtccagaccgat
ccggtcaccgtggtgggcatcggcgacatggccggcgacgtcttcggcaacggcctgctg
cgttcgcgcagcctggagctggtggcggccttcaaccacctgcacatcttcatcgatccc
aacccggacgccgagcgcagctatgtcgagcgcgagcggctgttcaacctgccgcggtcg
agctggaccgactatgacgccagcctgatctcccaaggcggtggcatcttcccgcgcagt
gccaagcgcatcgccatcagccccgagatgaaggcgcgcttcgacctgaccgccgatcac
ctgacgcccaacgagctgatcaacgccctgctcaaggcgccggtggacctgatctggaat
ggcggcatcggcacctacgtcaaggccagcttcgaaacccacgccgatatcggcgacaag
gccaacgacggtctgcgcgtcgatggctgcgacctgcgcgccaaggtgatcggcgagggc
ggcaacctgggcatgagccagctggcgcgggtggagttcggcctgcacggcggcgcctgc
aacaccgacttcatcgacaacgccgggggcgtggactgttccgaccatgaggtcaacatc
aagatcctgctgggcgatgtggtctccgccggcgacatgaccgtcaagcagcgcaatacg
ctgatgggcgagatgaccgacgaggtcggcgagctggtggtcgccaacaactacatgcag
accggggccctgtccctggcggagtatcgggcgcggacccacctggccgagtaccagcga
ctgatcgtggatctcgaagggcgcggcaagctggatcgtaccctcgaattcctgcccagc
gatgaggtgctcgccgaacgcgcggccaaggaacaggggctgacccgggccgagctgtcg
gtgctgatttcctacagcaagatcgacctcaaggaacagttgctggcctcttcggtgccg
gatgatgactacctcgcccgcgacatgcagggcgccttccctcaacgcctgaccgagcag
ttccccgaggccatggcgcgccaccgcctcaagcgcgagatcgtcgccaaccagatcgcc
aacgacctgatcaaccacatgggcatcaccttcgtgcagcgcctgtgcgaatccaccggc
atgagcgcggccgatgtcgcccgcgcctatgtggtgatgcgcgacgtgctgcacctgccg
cactggtggcgtcaggtggaagccctggatcatcaggtgccggctgacctgcagctgcgt
ctgatgagcgaactgatgcgcctggggcgccgggccacccgctggttcctgcgcagccat
cgcagtggtctggatgccggcgccgtggcggccttcttcgggccacgcatcgccgctctg
ggcgtacgcctggatgaactgctgcagggcgaaccgcgtcaggactgggaagagcgcttc
cgcgcctataccgaagcgggcgtacccgagctgctggcgcgcgtggtcgccgggaccaac
cacatctatacgctgctgccggtgatccaggcggcggaggtcaccgcccaggatccgctg
gcggtggcggccacctggttcgcggcgggcgatgtgctggatctggcctggtatcagcag
caactcaaccagctgccggtggccaatgcctggcaggccctggcccgcgaggcgttccgc
gacgaggtggatgtgcagcagcgcaccatcaccgtcgccatgctcaatctgagcgaggcg
ccgagcgatccggaagcccggttgtcactgtggctggaacgccatagggcggcggtggag
cgctggcggggcctgctggtggatctgcgcaatgccagcggccaggactatgcgatgtac
agcgtcgccagccgtgaactggcggatctggccagcagcagcgtctga
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