Pseudomonas benzopyrenica: V6W80_08380
Help
Entry
V6W80_08380 CDS
T10550
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pben Pseudomonas benzopyrenica
Pathway
pben03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V6W80_08380 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pben03400
]
V6W80_08380 (nth)
Enzymes [BR:
pben01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
V6W80_08380 (nth)
DNA repair and recombination proteins [BR:
pben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V6W80_08380 (nth)
Prokaryotic type
V6W80_08380 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WWM68279
UniProt:
A0ABZ2FVP8
LinkDB
All DBs
Position
complement(1801797..1802435)
Genome browser
AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRLHEDNPDPKTELAYASPFELLIAVILSAQATDVSVNKATARLYPVANT
PQAILDLGVEGLSEYIKTIGLYNSKAKNVIETCRLLLERHGGEVPQTREELEALPGVGRK
TANVVLNTAFRQLAMAVDTHIFRVSNRTNLAPGKNVVEVELKLLKVVPKAYLLDAHHWLI
LHGRYVCQARKPRCGSCRIEDLCEYKAKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccaaacgcctggaaatctttcgtcgcctgcacgaagacaatcccgacccc
aagacggagttggcctatgcctcgccgttcgagctgctgatcgcggtgatcctctccgcc
caggctaccgacgtcagcgtcaacaaggccaccgcccgcctctatccggtggccaacacg
ccccaggccatcctggatctcggggtagagggtttgtcggagtacatcaagaccataggg
ctctacaacagcaaggccaagaacgtcatcgagacctgccggctgctgctggagcgccat
ggcggcgaggtaccccagacccgcgaagaactggaggccctgcccggcgtgggccgcaag
accgccaacgtggtgctcaacaccgccttccgccagctcgccatggcggtggacacccat
atcttccgggtcagcaacagaaccaatctggcccccggcaagaacgtggtggaggtcgag
ctcaagctgctcaaggtggtgccgaaggcctacctgctggatgcccaccactggctgatc
ctgcatggccgctatgtctgccaggcgcgcaagccccgctgcggcagctgccgcatcgaa
gatctctgcgaatacaaggcaaaaacctctgacgattga
DBGET
integrated database retrieval system
