Pseudomonas benzopyrenica: V6W80_18820
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Entry
V6W80_18820 CDS
T10550
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pben Pseudomonas benzopyrenica
Pathway
pben00300
Lysine biosynthesis
pben00550
Peptidoglycan biosynthesis
pben01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V6W80_18820
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6W80_18820
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pben01011
]
V6W80_18820
Enzymes [BR:
pben01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
V6W80_18820
Peptidoglycan biosynthesis and degradation proteins [BR:
pben01011
]
Precursor biosynthesis
Amino acid ligase
V6W80_18820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WWM65750
UniProt:
A0ABZ2FM80
LinkDB
All DBs
Position
complement(3954171..3955640)
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AA seq
489 aa
AA seq
DB search
MSRLLTELLPEASAAVDIDGLALDSRDVRTGSLFLAIPGLHSDGRAHIASAVERGAAAIA
YEVKDAPALPNLDIPLIAVEGLAGKLSAIAGRFHGEPSQRLALVGITGTNGKTSVSQLIA
QACDLLGQRCGIVGTLGNGFHGALAEGRHTTPDPLKLQATLAELAAGGAASVAMEVSSHG
LVQGRVAALAFKVAVFTNLSRDHLDYHGTMAAYGEAKAQLFTWPGLGTRVLNIDDAFGRE
LAARPSPAATLTYSLSDPAASIHCQAVQFDDHGVRAQLVTAQGTGELRSQLIGLFNLSNL
LAAIGALLGLGHGLDAILAILPQLQGPAGRMQRLGGAGRPLVVVDYAHTPDALDKVLTAL
RPHVGAQGRLVCVFGCGGDRDRGKRPEMAAVAERLADQVVVTDDNPRTEDPAAIVADIRA
GFAQPEQVSFAGRREVAIAQAVAAATAQDIVVLAGKGHEPYQEIAGVRHPFSDLDQAERA
LTAWERQHA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcctgctgaccgaactcctgcctgaagccagcgctgccgtcgacatcgacggc
ctggcgctggacagtcgcgacgttcggacgggctcgctgttcctcgccattcccggcttg
cacagcgatggccgtgcccatatcgccagtgccgtcgaacggggtgccgcagccatcgcc
tacgaggtgaaggacgctcccgcgctgccgaacctggacatccctctgattgccgtcgaa
gggctggccggaaagctttccgccatcgccggccgtttccatggcgaacccagccagcgc
ctggcgctggtcggcatcaccggcaccaacggcaagaccagtgtcagccagctgatcgcc
caggcctgcgacctgctcggtcagcgttgcggcatcgtcggcaccctgggcaacggcttc
catggcgccctcgccgaaggccgccacaccaccccggaccccctcaagctacaggcgacc
ctggccgaactggccgccggtggcgccgccagcgtggccatggaggtctcatcccatggc
ctggtccagggccgggtggcagcgctggccttcaaggtcgcggtcttcaccaatctgtcc
cgcgaccacctcgattaccacggcaccatggccgcctatggcgaagccaaggcccagttg
ttcacctggcccgggctcggcacccgcgtcctcaatatcgatgatgcctttggccgcgag
ctggcagctcgccccagcccggcagcgaccctgacctacagcctgagcgatccggctgcc
agcatccattgccaggctgtccagttcgacgaccacggcgtgcgcgcccagctggtcacc
gcccagggcaccggcgagctgcgcagccagctgatcggactcttcaacctgagcaatctg
ctggccgccatcggtgcgctgctgggcttggggcatggcctcgacgccatccttgccatc
ctcccgcagctgcagggcccggccggacgcatgcagcgcctgggcggcgccgggcggccg
ctggtggtagtggactatgcacatacccccgacgccctggacaaggtgctcactgccctg
cggccccatgtcggtgcccagggtcgattggtctgcgtgttcggctgtggcggcgatcgc
gatcgcggcaagcggccggagatggccgcggtggctgagcgcctggccgaccaggtggtg
gtgaccgacgacaacccccgtaccgaggatccggccgccatcgtcgccgacattcgcgcg
ggcttcgcgcagcccgagcaggtgagcttcgccggccggcgcgaggtggcaatcgcccag
gccgtggccgcggcgaccgcccaggacatcgtggtgctggccggcaagggccatgagccc
taccaggaaatcgccggtgtccgccatcccttttccgatctcgaccaggccgagcgggcc
ctgaccgcctgggagcgacagcatgcttag
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