Prionailurus bengalensis (leopard cat): 122476475
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Entry
122476475 CDS
T07574
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3 isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04360
Axon guidance
pbg05017
Spinocerebellar ataxia
pbg05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
122476475 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
122476475 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
122476475 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pbg04040
]
122476475 (TRPC3)
Ion channels [BR:
pbg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122476475 (TRPC3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
122476475
NCBI-ProteinID:
XP_043425148
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Position
B1:102887630..102961709
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AA seq
941 aa
AA seq
DB search
MSTKVRKCKEQARVTFPAPEEEEEEEEEEGEDEGSEPQRRRRGWRGVNGGLEPRSAPSQR
EAHSYCPQRFSPGLDMSMEGSPSLRRKTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERF
LDAAEYGNIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIG
DALLLAISKGYVRIVEAILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPDITP
IILAAHCQKYEVVHMLLMKGARIERPHDYFCKCGDCMEKQRHDSFSHSRSRINAYKGLAS
PAYLSLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEV
EAILNGDLESAEPLEVHRHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLRE
QTIAIKCLVVLVVALGLPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFN
ASDRFEGITTLPNITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPRE
YILQLWNVLDFGMLSIFIAAFTARFLAFLQATKAQQYVDSYVQESDLSEVTLPPEIQYFT
YARDKWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVL
FIMVFLAFMIGMFILYSYYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFI
ENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTL
PPPFSLVPSPKSFVYFVMRIINFSKCRRSRLQKDIEMGMGNSKSRFTKCFAVHLNLMQHC
ELNLFTQSNSRVFESHSFNSILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEI
KQDISSLRYELLEDKSQATEELAVLIHKLSEKLNPSMLRCE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaggtcaggaagtgcaaggagcaagcgagggtgaccttccccgcgccggag
gaggaggaagaggaggaggaggaggagggtgaggacgaaggctcggagccgcagcgccgc
cggcggggctggaggggcgtcaacggggggctggagccgcgctcggcgccctcacagcgg
gaagcgcacagctactgcccgcagcgcttctcccccgggctggacatgtccatggaggga
agcccatctctgaggcgcaagacagtgatgcgggagaagggccggcgccaggccgtccgg
ggccccgctttcatgttcaatgaccggggtaccagcctcacagctgaggaagagcgcttc
ctcgacgctgccgagtacggcaacatccccgtggtgcgcaagatgctagaggagtccaag
acattgaacgtcaactgcgtggactacatgggccagaacgcgctgcagctggccgtgggc
aacgagcacctggaggtgacagagctgctgctcaagaaggaaaacctggcacgaatcggc
gacgccctgctgcttgccatcagcaagggctacgtgcgcatcgtggaagctatcctcaac
caccccggcttcgcagccagcaagcgcctgaccctgagcccctgtgagcaggagctgcag
gacgacgacttctatgcttacgacgaggacggcacacgcttctctcccgacatcacgccc
atcatcctggcggcgcactgccagaagtacgaggtggtgcatatgctactgatgaagggt
gccaggatcgagcggccacacgactatttttgcaaatgcggagattgcatggagaagcag
aggcacgactctttcagccactcacgctcgaggatcaatgcctacaaggggctggccagc
ccagcgtacctgtccttgtctagcgaggacccagtgctcaccgccttggagctcagcaat
gagttggccaagctggccaacatagagaaggagttcaagaatgactaccggaagctctcc
atgcaatgtaaagactttgtagtgggtgtgctggatctttgccgagactcagaagaggta
gaagccattctgaatggagatctggaatcagcagagcccctagaggtacacaggcataaa
gcttcactgagtcgtgtcaaacttgctattaagtatgaagtcaaaaagtttgtggctcac
cccaactgccagcagcagctcttgacaatctggtatgagaacctctcaggcctgcgggaa
cagaccatagctatcaagtgtctggttgtgctggtggtggccttgggccttccatttctt
gccatcggctactggattgcaccttgcagcaggctggggaaaattctgcgaagccctttc
atgaagtttgtggcacatgctgcttctttcatcatcttcctgggcctgctcgtgttcaat
gcctcagacaggttcgaaggcatcaccacgctgccaaacatcactgttattgactatccc
aagcagatcttcagggtgaaaaccacccagttcacttggactgagatgctaattatggtc
tgggttcttggaatgatgtggtctgagtgtaaggagctctggctggaaggacctagagaa
tatattttgcagttgtggaatgtgctggactttgggatgctttccatcttcattgctgct
ttcacagccagatttctagctttccttcaggcaacaaaagcacaacagtatgtggacagt
tatgtccaagagagtgacctcagtgaagttacacttccaccagagatacagtatttcact
tatgccagagataaatggctcccttctgaccctcagatcatatctgaaggcctctacgcc
attgctgttgtgctcagtttctctcggatcgcatatatcctccctgcaaatgagagcttt
ggccccttacagatctctcttggaaggactgtgaaggatatattcaagttcatggtcctc
tttattatggtgtttcttgcctttatgattggcatgttcatactttattcttactacctt
ggggctaaagtaaatgctgcttttaccactgtagaagaaagtttcaagacactgttttgg
tcaatatttgggttgtctgaagtcacttctgttgtgctcaaatacgatcacaaattcata
gagaatattggctacgttctgtatggaatatacaatgtaactatggtggtcgttttactc
aacatgttaattgctatgattaatagctcatatcaagaaattgaggatgacagtgacgta
gaatggaagtttgcccgttcaaaactttggttatcttattttgatgatggaaaaacatta
cctccacccttcagtctagttcctagtccaaagtcatttgtttattttgtcatgaggatc
attaacttctccaaatgcagaaggagccggctacagaaggatatagaaatgggaatgggt
aactccaagtccaggtttacaaagtgctttgctgtacatttgaacctcatgcaacactgt
gagttaaacctcttcactcagtctaactcaagagtttttgaatcacacagttttaacagc
attctcaaccagccaacacgttatcagcagataatgaaaagacttataaagcgatatgtt
ctgaaagcacaagtggacaaggaaaatgatgaagttaatgaaggtgaattaaaagaaatc
aaacaagatatctccagccttcgttatgaacttttagaggacaagagccaagcaactgag
gaattagccgttctgattcataaactcagtgagaaactgaatcctagcatgctgagatgt
gaatga
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