Prionailurus bengalensis (leopard cat): 122491801
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Entry
122491801 CDS
T07574
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03018
RNA degradation
pbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122491801
09123 Folding, sorting and degradation
03018 RNA degradation
122491801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbg03019
]
122491801
03041 Spliceosome [BR:
pbg03041
]
122491801
Messenger RNA biogenesis [BR:
pbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122491801
mRNA degradation factors
5'-3' decay
Lsm complex
122491801
Spliceosome [BR:
pbg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122491801
Complex C
U2 snRNP components
122491801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
vATP-synt_E
TIG_SUH
COG5_N
Motif
Other DBs
NCBI-GeneID:
122491801
NCBI-ProteinID:
XP_043450972
LinkDB
All DBs
Position
C2:107404031..107404657
Genome browser
AA seq
126 aa
AA seq
DB search
MRKDERSQSNGLSLYLKKLQGLKHGADDLDQQQTTNTVEEPLDLIRLSLDERIYVKMKNN
RELRGRLHAYDQHLNMILGDVEETMTTIEIDEETYKEVYKSTKRNIPMLFVQGDGVVLVA
PPLRVG
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagatgaaaggtctcaaagcaatggcctcagtttataccttaagaaacttcag
ggtttgaaacatggcgcagatgacttggaccagcaacaaactaccaacaccgtagaggag
cccctggatctcatcaggctcagcctggatgagcgaatttatgtgaaaatgaaaaataac
agagagcttcgaggcagattacatgcttatgatcagcatttaaatatgatattgggagat
gtggaagagactatgactaccatagaaattgatgaggaaacctacaaggaggtatataaa
tcaacaaaacggaatattccgatgctctttgtccagggagatggtgttgttctagttgcc
cctccattaagagttggctga
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