Prionailurus bengalensis (leopard cat): 122493078
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Entry
122493078 CDS
T07574
Symbol
SLIT1
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04360
Axon guidance
pbg04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122493078 (SLIT1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
122493078 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pbg00536
]
122493078 (SLIT1)
Glycosaminoglycan binding proteins [BR:
pbg00536
]
Heparan sulfate / Heparin
Axon guidance molecules
122493078 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
hEGF
LRRNT
LRRCT
LRR_1
LRR_9
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
122493078
NCBI-ProteinID:
XP_043453064
LinkDB
All DBs
Position
D2:complement(55794781..55970779)
Genome browser
AA seq
1534 aa
AA seq
DB search
MALTPGRGPSAGLVRPELWLLLWAAAWRLGATACPALCTCTGTTVDCHGTGLQAIPKNIP
RNTERLELNGNNITRIHKNDFVGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQ
LHSLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL
RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT
QCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVPSCTLSSGSCPAMCTCSNGIVDCRGKGL
TAIPANLPESMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLN
SLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSL
AKGTFTSLRAIQTLHLAQNPFICDCNLKGLADFLRTNPIETSGARCASPRRLANKRIGQI
KSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEASLVECSSLKLTKIPERIPQ
STAELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAGSVSELHLTANQ
LESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTL
QALSTLNLLANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE
EGQEEGGCLPRPQCPQECACLDTVVRCSNKHLQVLPKGIPKNVTELYLDGNQFTLVPGQL
STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH
GNDISTLQEGIFTDVTSLSHLAIGANPLYCDCHLRWLSGWVKTGYKEPGIARCAGPPDME
GKLLLTTPAKKFECQGPPALAVQAKCDPCLSSPCQNQGTCHNDALETYRCVCSSGYKGRD
CEVSLDSCSSSPCGNGGTCHPRQGEDAGFTCSCPTGFEGPTCEVNTDDCVEHTCANGGTC
VDGVGNYTCQCPLQYAGRACEQLVDFCSPDLNPCQHGAQCVGTPDGPRCECASGYAGNNC
SENQDDCRDHRCQHGARCVDGVNSYSCLCTEGYSGQFCETPPRPPAPRSPCEGTECQNGA
NCVDQGSGPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDN
GILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNL
SIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYIN
NELQDFTKTRMKPGVVPGCEPCRKLYCLHGICQPNATPGPVCHCEAGWGGLHCDQPADGP
CHGHKCVHGQCMPLDALSYSCQCQDGYSGALCNQAGAPVDPCGGLQCLHGHCQALATKGA
HCVCDPGFSGELCEQESECRGDPVRDFHQVQRGYAICQTTRPLSWVECRGSCPGQGCCQG
LRLKRRKFTFECSDGTSFAEEVEKPTKCGCALCE
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacgcccgggagggggccctcggcggggctcgtccgacccgagctctggctg
ctgctgtgggcagccgcgtggcgcctgggtgccaccgcgtgccccgccctctgcacctgc
accggcaccacggtggactgccacggcacggggctgcaggccatcccaaagaacatccca
cggaacacggagcgcctggaactcaacggcaacaacatcactcggatccataaaaatgac
tttgtgggactcaagcagctgcgggtgctgcagctgatggagaaccagattggagtggtg
gagcggggggctttcgacgacatgaaggagctggagcggctacgactgaaccggaaccag
ctgcacagtttgccagaactgctgttccagaataaccaggctctgtcgaggctggacctg
agtgagaacaccatccaggccatccccaggaaagcttttcgtggagctacagacctcaaa
aatttacagctggacaagaaccagattagctgcatcgaggaaggggccttccgggctctg
cgggggctggaggtgctgaccctgaacaacaacaacatcaccaccatccccgtgtccagc
ttcaaccacatgcccaagctgcggaccttccgcctgcactccaaccacctgttctgtgac
tgccacctggcctggctctcccagtggctgaggcagcggccaaccatcgggctcttcacc
cagtgctcgggccccgccagcctgcgtggcctcaatgtagccgaggtccagaagagtgag
ttcagctgctcaggccaaggagaagcgggccgagtgccttcctgcaccctgtcctccggc
tcctgcccggccatgtgtacctgcagcaatggcattgtggactgtcgtggcaaaggcctc
actgccatccccgccaacctgcctgagagcatgacagagatccgcctggagctcaatggg
atcaagtccatccctcccggagccttctctccctacagaaaactgcggaggatagacctg
agcaacaaccagattgcagagatcgctcccgatgccttccagggcctccgctccctgaac
tcgctggtcctgtatgggaacaagatcacagacctcccccggggtgtgtttggaggcctg
tacaccctacagctcctgctcttgaacgccaacaagatcaactgtgtccggcccgatgcc
ttccaggatctgcagaacctctcgctcctctccctgtatgacaacaagatccagagtctc
gccaagggcaccttcacctccctgcgggccatccagaccctgcacctggcacagaaccct
ttcatctgcgactgtaacctcaaggggctggcagacttcctgcgcaccaaccccattgag
acgagcggggcccgctgtgccagcccccggcgcctcgccaacaagcgcatcgggcagatc
aagagcaagaagttccggtgctcagccaaagagcagtatttcattccaggcacggaggat
taccagctgaacagcgagtgcaacagtgacgtggtctgtccccacaagtgccgctgtgag
gccagcctggtggagtgctccagcctgaagctcaccaagatccctgagcgcatcccccag
tccacggccgagctacgattaaacaacaatgagatttccatcctggaagccactgggata
tttaaaaaactcactcatctgaagaagatcaatctgagcaacaacaaggtgtccgaaatc
gaagatggggccttcgagggtgcgggctctgtgagcgagctgcacctgaccgccaaccag
ctggagtccatccggagcggcatgttccgaggcctggatggcttgaggacgctgatgctg
cggaacaaccgcatcagctgcatccacaacgacagcttcacgggcctgcgcaacgtccgc
ctgctctcgctctacgacaaccagatcgccaccatctcccctggggccttcgacaccctg
caggccctctccacgctaaaccttctggccaaccctttcaactgcaactgtcagctggcc
tggctgggggactggctgcggaggaggaagattgtgacagggaacccgcggtgccagaac
ccagacttcctgcggcagatccccctgcaggacgtggccttccctgacttcaggtgtgag
gaaggccaggaggaggggggctgcctgccccgcccccagtgcccccaggaatgtgcctgc
ctggacacggtggtccgatgcagcaacaagcacctccaggtcctgccgaaaggcatcccc
aagaatgtcacggaactttacttggatgggaaccagttcaccctggttccgggacagctg
tctaccttcaagtacctgcagcttgtggacttgagtaacaacaagatcagttccttgagc
aactcctccttcaccaacatgagccagctgaccactctgattctcagctacaacgccctc
cagtgcatccctccgctggccttccaggggctgcgctccctgcgcctgctatccctgcat
ggcaatgacatctccaccctccaagagggcatcttcacagacgtgacctccctgtctcac
ctggccattggtgccaaccctctgtactgtgactgccacctccgctggctgtctggctgg
gtgaagacgggctataaggaaccgggcattgcccgctgtgctgggcccccggacatggag
ggcaagctgctcctcaccacgcctgccaagaagtttgaatgccaaggtccccccgcgctg
gctgtccaggccaagtgtgatccctgcttgtccagcccgtgccagaaccagggcacttgc
cataatgatgcccttgagacgtacaggtgtgtctgctccagcggctataagggccgtgac
tgcgaggtgtccctggacagctgttccagcagcccctgtggaaacggcgggacctgccac
ccgcggcagggcgaggatgctgggttcacgtgttcctgtcccactggctttgaaggaccg
acctgtgaggtgaatacggacgactgtgtggagcacacatgtgccaacgggggcacctgt
gtggatggcgtgggcaactacacctgccagtgccccctgcagtatgcgggaagggcctgt
gagcagctggtggacttctgttctccagatttgaacccgtgtcagcacggagcccagtgc
gtgggtactccagatggacccaggtgtgagtgcgcatcaggttatgcaggtaacaactgc
agtgagaaccaggatgactgcagggaccaccgctgccagcatggggcccggtgtgtggat
ggagtcaacagctactcttgcctctgtactgaaggctacagtgggcagttctgtgagacc
cctccccgcccacctgcccccagaagcccctgcgaggggactgagtgccagaatggagcc
aactgtgtggaccagggcagcgggccggtgtgccagtgccttccaggtttcggcggcccc
gagtgtgagaagttgctcagtgttaactttgtggatcgggacacctacctgcagttcacc
gatctgcagaactggccacgggccaacatcacgctgcaggtctccacggcagaggacaat
gggatcctgctgtacaatggggacaatgaccacatcgcagtggagctgtaccagggtcat
gtgcgtgtcagctacgacccaggcagctaccccagctctgccatctacagtgctgagacg
atcaatgacggtcagttccacactgttgagctagtcacctttgaccagatggtgaatctc
tccatcgatggaggcagtcccatgaccatggacaactttggcaaacactacacactaaac
agcgaggcccccctctacgtgggagggatgccagtggatgtgaactcggctgccttccgc
ctgtggcagatcctcaacggcaccagcttccacggttgcatccgaaacctgtacattaac
aacgaattgcaggacttcaccaagacgcggatgaagccaggcgtggtgccaggctgtgag
ccctgccgaaagctctactgcctgcatggcatctgccagcccaatgccacccctgggccc
gtgtgccattgtgaggccggctgggggggcctacactgtgaccagccagccgacggcccc
tgccatggccacaagtgtgtccacgggcaatgtatgcccctcgacgctctctcctacagc
tgccagtgccaggatgggtactcgggggctctgtgcaaccaggctggggcacctgtagac
ccctgcgggggcctgcagtgcctgcatggccactgccaggccttggccaccaaaggggca
cactgtgtgtgtgacccaggcttttcgggcgagctgtgtgagcaagagtccgagtgccgg
ggggaccctgtccgggactttcaccaggtccagaggggctatgccatctgccagaccacg
cgcccgctgtcgtgggtggagtgccggggctcatgcccaggtcagggctgctgccagggc
ctgcggctgaagcggaggaagttcacctttgagtgcagcgacgggacctcttttgccgag
gaggtggagaagcccaccaagtgtggctgtgccctctgcgagtag
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