KEGG   Caldimonas brevitalea: AAW51_4718
Entry
AAW51_4718        CDS       T04216                                 
Symbol
dksA
Name
(GenBank) conjugal transfer protein TraR
  KO
K06204  RNA polymerase-binding transcription factor
Organism
pbh  Caldimonas brevitalea
Brite
KEGG Orthology (KO) [BR:pbh00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02026 Biofilm formation - Escherichia coli
    AAW51_4718 (dksA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pbh03000]
    AAW51_4718 (dksA)
   03021 Transcription machinery [BR:pbh03021]
    AAW51_4718 (dksA)
   03009 Ribosome biogenesis [BR:pbh03009]
    AAW51_4718 (dksA)
Transcription factors [BR:pbh03000]
 Prokaryotic type
  Other transcription factors
   Others
    AAW51_4718 (dksA)
Transcription machinery [BR:pbh03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     AAW51_4718 (dksA)
Ribosome biogenesis [BR:pbh03009]
 Prokaryotic type
  rRNA transcription factors
   AAW51_4718 (dksA)
SSDB
Motif
Pfam: DksA_N zf-dskA_traR DUF8581
Other DBs
NCBI-ProteinID: AKJ31409
UniProt: A0A0G3BPQ1
LinkDB
Position
5541530..5541991
AA seq 153 aa
MPQADPKLASAWKNKSGRELTDAEVLAMPESEYMSDQQLEFFRAKLETLKEDLLSNAGET
TEHLREDTTIVPDPADRATIEEEHALELRTRDRERKLLKKISQALTRIEAGDYGFCDETG
EPIGLGRLIARPTATLSLEAQQRRELKQKLFGD
NT seq 462 nt   +upstreamnt  +downstreamnt
atgcctcaagccgaccccaaactcgcctctgcctggaaaaacaagtccgggcgggaactg
acagacgccgaagtgctcgcgatgcctgaaagcgagtacatgagcgatcagcaactcgaa
ttcttccgggccaagctggaaacgctgaaagaagatctgctcagcaacgccggcgaaacg
acggaacatctgcgcgaagacaccaccatcgtccccgacccggccgaccgcgccaccatc
gaggaagagcacgcgctggaactgcgcacgcgcgaccgcgagcgcaagctgctgaagaaa
atctcgcaggcgctgacccgcatcgaggccggcgattacggtttttgcgacgaaactggc
gaacctatcggccttggccggctgattgcccgcccgaccgctacactctccctggaagct
caacaacggcgtgagctcaagcaaaagctgttcggagattga

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