Python bivittatus (Burmese python): 103062221
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Entry
103062221 CDS
T03091
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
pbi
Python bivittatus (Burmese python)
Pathway
pbi04622
RIG-I-like receptor signaling pathway
pbi04623
Cytosolic DNA-sensing pathway
pbi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pbi00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103062221 (DDX58)
04623 Cytosolic DNA-sensing pathway
103062221 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103062221 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pbi04054
]
103062221 (DDX58)
Enzymes [BR:
pbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103062221 (DDX58)
Pattern recognition receptors [BR:
pbi04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
103062221 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_19
CapR
Motif
Other DBs
NCBI-GeneID:
103062221
NCBI-ProteinID:
XP_015744447
UniProt:
A0A9F3QTK3
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MTDVERENLLRCRKYIVKTLNPAYILSYMKTWLSDETVEKIQEQSDRPTMAAEFFLQSVV
ELSTDGWFRGFLDALKAAGYSGLYQAIENWDFKIIENLEPHRELLKRIEPTLQDIDIKEV
HYHMRKCLLDQEWEEILQVRERKGRKAGASKLVDCLCRSDKEDWPETFHQALDATKYKNQ
RDLWNLKGDDNADVEMANEDEGSCVFKILQFSEEAESDNLCGSSPLNAFQQTTGIPWKAR
SYQIELAEPALNGKNTMICAPTGSGKTFVSIMICEHHLCNRPAGQEGKVVFLTPKVPVYE
QQKKVFHEYFKNNYSVAGVCGENASLFPADMVIKGNDIIVMTPQNLLNSLNNETLPSLSI
FTLMIFDECHNTTGNNPYNMLMFKYLDLKLEQSGIPLPQIVGLTASPGIGTAKKLDEAIE
HICKFCASLDIGVISTVRKNTKDLEEIVHKPEKIIRLVGNRPQSHFVDIVSQMMSKVEDL
ARQFYPIDTLSKLKSHCYGTQSYEQWIVNVQKNSVVLQLPNKEEESRICKALFICTEHLR
KYNDALIINEDARTKDALVYLKDFFEDTKNGKFDYIERQLASNFEVKLPELTAASQDESN
ENPKLEDLAEILGEAYHFNPETRTILFVKTRALLAALKNWVEETPELKHLKPETLMGRGK
RNQHTGMTLPNQKVILDDFKTNGDSKLLIATSVADEGIDIPQCNLVLLYEYTGNIIKMIQ
VRGRGRAKDSKCILVTSKKELEEKERYNLQKEEMMIKAIEVVQSWDEKKFVQKISALQKM
QKVKKKLAQPKPWINNRVLLCGRCKKYACSTENLRVIEDSHHTVLDEEFRTRYKTEPHKK
KNSYGNFEKKCKMHCVNCHHDWGITVKYKVFEDIPIIKIESFSVQDVVSNKQFHFRKWRD
VDFAMKDFDIDEMPE
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtggagcgagagaatttgcttcgctgcaggaaatatatagtgaagacttta
aatcctgcttatatattgagctacatgaaaacctggctgtccgatgagaccgtggagaaa
attcaagagcaaagtgatcggccaaccatggcagcagaattctttcttcagtccgttgta
gagctcagcacggatggatggttccgtgggtttctggatgcactaaaagcagctggttat
agtggcctttatcaagcaattgaaaattgggatttcaagataattgaaaatctggaacct
cacagggaattgttgaaacgaattgagcctactttgcaggacattgacatcaaagaagtt
cattaccacatgaggaagtgcctcttagaccaggaatgggaagaaattctccaggttaga
gaaaggaaagggagaaaagcaggtgcaagcaaacttgtagactgtctgtgtagatcggac
aaagaagattggcctgaaaccttccaccaggcactggatgcgactaaatacaagaaccag
agagacctatggaatttgaaaggagatgataatgcggacgtcgaaatggcaaatgaagat
gaaggcagctgcgtatttaaaattctacagttttctgaagaagcagaatctgacaatctt
tgtggaagttcacctttaaatgccttccagcagaccacaggtattccgtggaaggcgaga
agctatcagatagaacttgctgagcctgctctcaatggcaaaaacaccatgatttgtgcc
cctaccggatctgggaagacctttgtgtctattatgatatgtgagcatcatctctgcaac
aggcctgctgggcaggaaggaaaagtggtcttccttactccaaaagtcccagtctatgaa
caacagaagaaagtcttccatgaatacttcaaaaacaactacagcgttgcaggcgtctgt
ggggaaaatgcttccttgttccctgcagacatggttattaaagggaacgatattattgtc
atgaccccccagaatcttttgaactctctgaataatgagacacttccttctctttcaata
ttcacactgatgatatttgatgagtgccacaacactacggggaataacccatacaatatg
ttaatgttcaagtacttggaccttaaactggaacaaagtggaattccactacctcagatt
gtaggactgaccgcttctcctggcattggcactgccaaaaagctagatgaggccatagaa
catatctgcaagttttgtgcttcactcgatattggagtgatatcaacagtcagaaagaac
acaaaggatctagaagaaattgtgcataaacctgaaaaaattattaggcttgttgggaat
cgtccacaaagtcacttcgtggatattgtgtctcagatgatgtcgaaagtggaggatctg
gcaagacagttttatcctattgataccttgtctaagttgaagagtcattgttatgggacc
cagagctacgagcagtggatagttaatgtgcagaagaacagtgtggtgttacagttgccg
aataaggaagaagaaagccgaatctgcaaggctctttttatttgcacggaacacctccgg
aaatacaatgatgccttgataatcaatgaagatgcccgaaccaaagatgctctggtttat
ctgaaggatttttttgaggatacgaaaaatggcaaatttgattatattgaacgtcagctg
gcttcaaattttgaagttaaattgccagagctcactgctgcttcccaggatgaatccaat
gaaaaccctaaattggaggatcttgcagagatcttgggagaggcatatcatttcaaccct
gagacacgcactattctctttgtgaagacaagagcactgctagcagcattgaagaattgg
gtagaagaaacacctgaacttaagcacctgaaaccagagacattgatgggacgtgggaaa
agaaaccagcatacaggcatgaccctcccaaatcaaaaagtgattttggatgatttcaaa
accaatggggacagcaagctgctaatagcaacttcagttgctgatgaagggatcgatatt
cctcagtgcaacctggtcctgctatatgaatatacaggcaacatcatcaaaatgatacaa
gtccgaggtcgtggaagagcaaaagacagcaagtgcattcttgtgactagcaaaaaagag
cttgaagagaaggagagatacaatttacaaaaagaggaaatgatgatcaaggctattgaa
gtggtgcagagctgggatgaaaagaaatttgtgcagaagataagtgcgttgcaaaagatg
cagaaagtgaagaaaaaactggcacaaccaaaaccctggataaacaatcgagtcctcttg
tgtggcagatgcaagaaatatgcctgcagcacggagaacctccgggtgatcgaggattcg
caccacactgttttagatgaggaatttagaacacgatataaaacagaacctcacaagaag
aaaaacagctacgggaattttgagaagaaatgcaagatgcactgcgtcaactgccatcat
gattggggaatcacagtgaagtacaaggtatttgaggacataccgatcatcaaaattgag
agcttttccgttcaggatgttgtcagcaataagcagtttcacttccgaaaatggagggat
gttgattttgcgatgaaagactttgatattgatgaaatgcctgaatga
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