Desulfobaculum bizertense: LWC08_12055
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Entry
LWC08_12055 CDS
T07819
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pbiz
Desulfobaculum bizertense
Pathway
pbiz01501
beta-Lactam resistance
pbiz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LWC08_12055
01503 Cationic antimicrobial peptide (CAMP) resistance
LWC08_12055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbiz02000
]
LWC08_12055
01504 Antimicrobial resistance genes [BR:
pbiz01504
]
LWC08_12055
Transporters [BR:
pbiz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LWC08_12055
Antimicrobial resistance genes [BR:
pbiz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LWC08_12055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
UIJ39482
LinkDB
All DBs
Position
complement(2635204..2638338)
Genome browser
AA seq
1044 aa
AA seq
DB search
MSRFFIDRPIFATVISILITLAGLLAIRVLPVAQYPELVPPEVNVSTVYPGASADVIAKT
VAAPLEQEINGVDNMLYLQSSSSGSGALSMSITFKLGTDPDQATINVNNRVQAALAGLPA
EVRQQGVTVKKRSPSMLEVVNIESDGRYDSVYMGNYALINVLDDLKRVEGVGDAMIFGDH
DYSMRVWIRPDKLAQLKLTPSDIANAIREQNAQFAAGGIGLEPLGDPVELTYTVTTQGRL
ADENEFGNIILRANPDGTMLRLKDVARVELGAYSYSVVSKHNGNDSIAIGVYLAPGANAL
DTADRVSAKMEEISKRFPDGIEYKIPFDTTEFIRISVNEVVHTLFEAMALVFIIIFIFLQ
NWRATVIPCLAVPVSIIGTFAGMYILGFSVNTLTLFGLVLAIGIVVDDAIVVIENVERIM
ETEGLNPHDATVKAMEEVTGPVIAIVLVLCSVFIPVAFMGGLAGEMYKQFAVTIAVSVIL
SGIVALTLTPALCSLLLKQERKAPIAPLRWFNSFFDRITARYTAGVRFILKRTALGVSIF
ALLCGATWMLFQHVPGSLVPEEDQGYIISAAFLPDGASLSRTQAVTDKVSKMMLDNPAIQ
DTIEISGFDLFSGSPKTNSSTIFLNLTDWDKRDESQSSNAVVGNIFGYGYGFTDALVMAF
NPPPISGMSNTGGFEGYVQNRAGDDPREMARKVQAFAAEANKRPELTAVRTTFSANAPQI
HVELDREKAKSLGVPVNRVFETMQSTFGAYYVNDFNKLGRTFRVQLQSEGEYRKTPDDLK
NVYVRSENGKMIPLTALVNIRQETGPDVLERFNVFPAAKVMGSPAPGYSSGQALEVMEEL
AHKYLPESYTLSWTGSAYQEKATGGTSAQVLLLALLMVFLILAAQYERWSLPFAVIMVVP
FALFGAISANFLRGLSNDVYFQIALVTLIGLSCKNAILIVEFAAMIHREGKDIMHAAAEA
ARLRFRPIVMTSLAFILGCMPLATSHGAGAASRHSIGTGVIGGMLAATFIATFFIPAFYM
TVASLTEKSRGISKKVKNRRKDEQ
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atttcacgcttttttattgaccgtccaatctttgcgactgtcatctctatcctgattacg
ctggcaggcctgctggcaatcagggtactgccagttgctcagtatccggaacttgttccg
ccagaagtcaatgtctccaccgtgtaccccggcgcaagtgctgacgttatcgccaaaacg
gtagcagctccacttgagcaggaaatcaacggcgttgacaatatgctctacctccagtct
tccagttctggcagtggcgcgctgagcatgagtatcacctttaaacttggcacggacccc
gaccaggccactattaacgtcaacaaccgcgttcaggcagctctggcaggtcttcctgcc
gaagttcgccagcagggtgtgaccgtcaaaaaacgttcacccagtatgctcgaggttgtg
aatattgagtctgatggccgttatgactccgtgtacatgggcaactacgccctgattaac
gtccttgacgacctcaagcgtgttgagggtgttggtgatgccatgatctttggcgatcac
gactactccatgcgtgtctggattcgtccggacaagcttgcccagctcaagctgacgcca
agcgacatcgccaacgccattcgcgagcaaaacgcccagttcgctgctggtggtattggc
cttgagcctttgggtgaccccgtggaactgacctacacagtcaccacacagggccgactc
gctgacgaaaatgaattcggcaacatcatcctccgcgccaaccccgacggcacgatgctg
cgtcttaaggacgtcgcccgtgtcgagcttggtgcatacagctacagcgttgtcagtaaa
cataacggcaatgattctattgccattggtgtttaccttgctccgggcgctaacgccctt
gataccgcagaccgcgtgtctgccaagatggaagaaatcagcaagcgcttcccggatggc
attgagtacaaaatcccgtttgataccacggaattcattcgaatttcggtcaacgaggtt
gtgcacacgctgttcgaagcaatggcccttgtttttatcatcatctttatcttcctccag
aactggcgcgccacagtcattccatgtcttgcggtcccggtatccattattggtaccttc
gcaggcatgtatattcttggcttctcggtcaacaccctgaccctgttcggtctggttctg
gccattggtatcgttgttgacgatgctattgttgttattgagaacgtcgaacgtatcatg
gagaccgaggggctgaatcctcacgacgcgacagtcaaggcaatggaagaagtaaccggt
ccggttatcgccattgttctggtgctctgctcggtatttatcccagtcgcattcatgggt
ggtctggctggtgaaatgtacaaacagtttgctgttaccatcgcggtttcagttattctg
tctggtattgtcgcactgaccctgaccccggcactctgctccctgctcctcaagcaggaa
cgcaaggcccccattgcaccacttcgctggttcaacagcttctttgaccggattacggcc
cgctacacagcaggcgttcgcttcatcctgaaacggacagcgcttggtgtttccatcttt
gccctgctttgcggtgcaacgtggatgctcttccagcacgttcccggctctctggttcca
gaagaagaccaaggctacatcatttcggcagcattcctgccggatggagcttcactctcc
agaacacaggccgtcacagacaaggtctccaagatgatgctggataacccagccattcag
gataccattgaaatctctggctttgacctcttctctggttctccaaaaacaaactcttca
acaatcttcctgaacctcacggactgggacaagcgtgacgaatcgcagagttccaatgcg
gttgtaggaaatatctttggctacggatacggctttaccgacgcactggtaatggccttt
aacccgccgcccatcagtggcatgtccaacacgggtggttttgaaggctacgtccagaac
cgcgccggtgatgatccccgtgaaatggcacgcaaggttcaggcctttgctgccgaagca
aacaagcgcccagagctgactgctgttcgtacgacattcagtgccaacgctcctcagatt
cacgtcgagctcgaccgcgaaaaggccaaaagccttggcgttccggtcaaccgtgtcttt
gagaccatgcagtccacctttggcgcctactacgtgaacgacttcaacaagctgggccgt
accttccgcgtacagctccagtccgaaggcgaataccgtaagactccagacgacctgaaa
aacgtctacgtccgttccgagaacggcaaaatgattccgctgaccgctctggtaaacatc
cgtcaggaaacaggcccagacgttctggaacgcttcaacgtgttcccggccgcaaaggtc
atgggttctccggcccccggatacagctctggtcaggctctcgaagtcatggaagagctg
gcccacaaatacctgccagaaagctatacgctgtcatggacgggttcggcctatcaggaa
aaagccactggcggcacctccgctcaggttctgcttctggccctgcttatggtcttcctg
attctggctgcccagtatgaacgctggagcctgccatttgcagttatcatggtggttccc
tttgcactctttggcgccatttctgcgaacttcctcagaggtttgtcaaatgacgtctac
ttccagattgcactggtcaccctgattggtctttcgtgtaaaaacgccattcttatcgtt
gagttcgcagcaatgattcaccgcgaaggcaaagacatcatgcacgccgcagcagaagcc
gcacgactgcgcttccgcccaatcgtcatgacctctctggccttcattctcggttgtatg
cctctggccacaagccacggtgctggtgcagccagcagacattccatcggtactggtgtt
attggcggcatgctggccgcaacattcattgcaacattctttattcctgcgttctacatg
accgttgcaagcctcacggagaaatcccgaggaatcagcaagaaggtcaaaaacaggcgt
aaagacgaacaataa
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