Paenibacillus beijingensis: VN24_23435
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Entry
VN24_23435 CDS
T03802
Name
(GenBank) antiporter
KO
K08168
MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
Organism
pbj
Paenibacillus beijingensis
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbj02000
]
VN24_23435
01504 Antimicrobial resistance genes [BR:
pbj01504
]
VN24_23435
Transporters [BR:
pbj02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-2 (14 spanner) (DHA2) family [TC:
2.A.1.3
]
VN24_23435
Antimicrobial resistance genes [BR:
pbj01504
]
Gene variants
Tetracycline resistance genes
Transporters
VN24_23435
Gene sets
Vancomycin resistance modules
Tetracycline resistance, efflux pump Tet38 [MD:
M00704
]
VN24_23435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_4
OATP
Motif
Other DBs
NCBI-ProteinID:
AJY76970
UniProt:
A0A0D5NP77
LinkDB
All DBs
Position
complement(5191763..5193160)
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AA seq
465 aa
AA seq
DB search
MEEEIRQQNGEKLIRILMMTLTLSVISAFMFNIVLPQIRDEFDLTTSEVSWMSSAYTLIY
AIGSVTYGKLADRYRLKNLLTFGLLLFAFGSLIGLFSQTFGMVLFGRCLQAMGAAVVPAT
AMLIPVRYFAPERRGAAIGTATVGMALGNALAPVIAAFVVSVTNWRWLFALPLLILLTLP
FYRKYLDDEQGRPVKMDWIGGGLLAVTVAMLLLSVTNGTWSFAACGLLTLALFIARTRSA
DEPFIEPRLFRNRRYTLGLSIVFLVSGIGFSLVFLTPQLLAQVHELPPERIGFAMVPAAI
AMALLGKTTGTMADSRGHVYVFYLASGSLIASFGLLSTFTAISPFIIAVFLIFGNVGQSS
MLIAMSKSISTTLPKEHTGVGMGIFSLLNFISSAMAAGLYSRMVDLGSDFRLNPVYFYTG
GVVFSNIYFVLAALHVAILVFYYFQFGRERERVSGHLVVNRSKQG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggaaatccggcagcaaaacggagagaagctgattcgaatcctgatgatgacg
ctcacactgtccgtgatcagcgcatttatgttcaatattgtacttccccagattcgggac
gaatttgatctgacgacatcggaggtcagttggatgtcttccgcttatacgctgatctac
gcgatcggtagcgtgacgtacgggaagctggcggatcgttacaggcttaagaacctgctt
acgttcgggctgctgctctttgctttcggttcactgatcggtttgttctctcaaaccttt
ggaatggttctattcggcaggtgcttgcaggctatgggggcggccgtagtccccgcaacc
gccatgctcattcccgtgcgttacttcgctccggagcgcagaggcgccgcgatcggcacc
gcaacggtaggcatggctcttggcaatgctcttgctcccgttatcgcagcttttgtcgtc
agtgtcacaaattggcgctggttatttgctctgccgcttcttattttgcttacactgcct
ttttaccgaaagtatttggatgacgaacaaggccggcccgttaaaatggactggattggc
ggagggttgttagctgtaacggtggccatgctgctgcttagtgtgacaaacggaacgtgg
tcgtttgcggcctgcggcttgctgacactggcgttattcatcgcccgcactcgctccgcg
gacgaaccgttcatcgagccccggcttttcaggaacagaaggtatacgctcggtttatcg
atcgtttttctcgtaagcggaatcgggttctcgctagtattccttactccgcagcttctc
gcccaagtccatgaactgccgcccgaacgaatcggctttgccatggttccggcagcgatc
gcgatggccttactcgggaagacaaccggcacaatggccgactcgcgggggcacgtttat
gtattttatttggcgtcgggatcgttaatcgccagttttgggctgctttcaacctttacc
gccatttcaccctttatcattgctgtatttctgatcttcggcaatgtcggtcaatcctcc
atgctcattgcaatgtccaaatcgatttcgacgacattgccgaaggaacacacaggagtc
ggcatggggatattctcgctgctgaatttcatttcgtccgcaatggctgccggcctgtac
agcaggatggtggatctcggttccgatttccgcttgaacccggtatacttctacacgggc
ggtgttgtattcagcaatatttatttcgtccttgctgcactgcatgtcgccattctggtg
ttttattacttccagttcgggcgggaaagagagcgggtctccggtcatttggttgtaaat
cgaagcaaacagggatga
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