Paracoccidioides lutzii Pb01: PAAG_07281
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Entry
PAAG_07281 CDS
T02230
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pbl
Paracoccidioides lutzii Pb01
Pathway
pbl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PAAG_07281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbl03400
]
PAAG_07281
Enzymes [BR:
pbl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
PAAG_07281
DNA repair and recombination proteins [BR:
pbl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
PAAG_07281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
Motif
Other DBs
NCBI-GeneID:
9093949
NCBI-ProteinID:
XP_015700623
UniProt:
C1H940
LinkDB
All DBs
Position
Unknown
AA seq
1076 aa
AA seq
DB search
MGFKFSYVCDLFSNLEANLTLKVSTASIKRNPDLATIESWFSHYAKQIHDGKTDRLALLS
CLFPERRPERVFGLKEPSLVKVIGRCLLLGVTKRQELDSYRTCGNGDLGNCVERVMKQAE
DDIHEESGVTVEEIDNVLNQIASRCRFSGPDLRRQRTAANVDEALSPVFRRLTSREAKWF
TRIILKDISPVTLPAPFVLRNFQFHLPDLLLVQDSFGAALDLLSCDPMRRFPPRPDPQYA
KLLVSFAASHIPLTVGIKVGRPIFYKARGVKHCCKMAGKRTMSVERKYDGEYCQIHINLA
KRPNCIQIFSKSGRDSTADRSGVHSTLKECLRIGKSGSKISRNCILEGELLVWSDVKSKL
LPFHKLRKHVARSGSFIGAKNDSQPHPYEHLYIMFFDILLINDDVCLPKSYRERRVLLKE
IVNPVKGRAVIVEQEYIDFSLPNTEEVLKAHFSRAISQCWEGLVLKGSEEPYFAIDQNED
PNIGHWIKLKKDYITGLGDTADFAIVGARYDAREATKLVEVKGLTWTSFFVGCREKNGRF
FYNSEPVFRIVDVVSRNNMNIQLIRTLNQFGQFCSCVLDDEDLPLSIRSDQIQLPEPQVL
FKTPFVVEMLGGGFKRRPGVNYFTLRFPRVLKIHNDRDVEDATTLEELQMLAKEASSVPT
DELSQERVRWEEKLEAADGNPGYIMDALEQSSMSVASGVSPTEVYNQSPNEHRDPLSTIE
QDILPELPHSTEIAPSTPTLSSPKPTEISIRQRGPKDASQKRFKRLRSQSPCITIRADNT
HTMTNTSISNSQDDQMSRHLANLTNLSQSNTNQTNHRSSDSQSVIDLTTIPNSQVECMAT
PGQCTEVESQGSLEPGQQAPSQSCSQDQLPSKVNVGFKRRKLSAQASVSLDSIIRSTNLS
LRPPAFLSETPILRGTGVSHNGIHLIFHSANQHLTSSFADFLDSPNALDATQIASDIAQI
GNLLAAKQRVGTLPVQRGKILFLHWKAFFEHGLIENSKVKQFEGIREQWEKVGEKAFAGC
LKWGYGMTSLRRKRKQRIFDHEVDGKAGENGPLGVVSSSPPPTDVDVQLSFYWREI
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgggatttaagttttcctatgtgtgcgatctcttttcgaacctcgaggccaaccttacc
ttgaaggtgtcaaccgcatctataaagagaaacccagatcttgcaaccattgagagctgg
tttagtcactatgcgaagcaaatccatgacggaaagacggatcgtcttgctcttctatca
tgtttgtttccggaaaggcgcccggagagagtatttggtttaaaggagccgtcgctcgtc
aaggttattggtcgatgtcttcttcttggggtgacaaagagacaggaactagattcgtat
aggacgtgcgggaatggggatctggggaattgtgtggaaagggtgatgaaacaagcggag
gatgacatccatgaggagtctggagtaactgttgaagaaatcgacaatgtcttaaatcag
atcgcatctagatgtcggttctccggcccagatttgaggcgacagcgaacagctgcaaac
gtggatgaagcgctttcgccagttttccggcggcttactagccgtgaggccaagtggttt
acaagaatcattttgaaggatatcagccccgtaaccttgccggctccttttgtcttgaga
aattttcaatttcatcttccggatctgcttctagtgcaggattcttttggggctgcgcta
gatttactgagctgtgaccctatgagacgattccctcctcgcccagatccccaatatgct
aagcttctggtttcttttgcggcatctcatataccccttaccgttggaataaaggttgga
aggccaattttttacaaagccagaggggttaaacattgttgcaagatggcaggaaaacgc
acaatgagcgtggaacgcaaatatgatggagagtattgccagatacatattaatcttgcc
aaacgaccgaactgcatacaaattttctcaaaaagtggcagagactcaactgcggacagg
agcggtgttcattccactctaaaggaatgcctaaggatcggaaagtccggcagcaaaatt
tcccggaactgcattttagagggagaacttctcgtctggagtgatgtgaaatcgaaacta
ctgccgtttcataaacttcgaaaacacgttgctagatctggctccttcattggggcaaag
aacgattcccaaccgcatccctacgaacacctctatataatgttttttgatatattgttg
attaatgatgacgtttgtttaccgaaatcgtatcgagaacgcagggtgctactaaaagaa
attgtaaaccctgtcaaagggcgtgctgtgatcgtggagcaggaatatatcgatttttcc
ttgccaaatactgaggaggttttaaaggcgcatttctccagagctatttcgcagtgctgg
gaggggcttgttttaaaaggcagtgaagagccgtactttgctatcgaccaaaatgaagat
cctaacatcggacactggattaaattaaagaaggattatataacagggctcggtgatacc
gcagatttcgctatagtcggggccaggtacgatgctcgcgaggcgacgaaactagtggag
gtaaaaggcctcacgtggacttcgttctttgtaggatgcagagaaaagaatggcagattc
ttctacaattcggaaccggtattccgtatagtagatgttgtcagccgaaacaacatgaac
attcaactcatacgaacgctaaatcaattcggccagttttgcagttgcgttttggatgat
gaggaccttccactttccatcagaagcgatcaaatacaactgcctgaaccacaggttctt
ttcaaaaccccgtttgtggttgagatgctaggaggtggttttaagagacgtccaggtgta
aactatttcacattacgatttccccgggttctgaagatacataacgaccgggatgttgag
gacgctacaaccttagaggagctgcaaatgttggcaaaagaggccagctcagtcccgacg
gatgaactatcgcaggagcgcgtccggtgggaggaaaagctagaagctgcagatggcaac
cctggatatatcatggatgcgttagagcaatcgtccatgtctgtggcctcaggagtctca
ccaacggaagtatacaatcaatctcccaatgaacacagagacccattgtctacaattgaa
caggatattttacctgaattaccacatagtacagagatagctccctcaacgccaacactt
tcctcaccaaaaccaacagaaattagtattcgccaaaggggtccgaaagatgcaagccag
aaacgatttaaaagattgagatcacaatcaccttgcatcacaatacgtgcagataatacg
catacaatgacgaacaccagcatttcaaattcacaggatgatcagatgagtcgccatttg
gcgaatctcaccaacctatcccaatccaatacaaatcaaaccaaccaccgttcctctgat
agtcagagcgtaatagatttgacaacaatccccaacagtcaagtagaatgtatggcaacc
cctggacagtgtacagaagtcgaatcacagggttcacttgaaccaggccagcaagctcca
agccaatcatgtagccaggatcaactaccctctaaagtcaatgttggcttcaaacggaga
aagttatcagcacaggcatctgtcagtttagacagcataatcaggtctaccaacctctct
ctcagacccccagctttcctatctgaaacacccatcctgagaggaactggagtatctcat
aatggtattcacctcattttccatagtgcaaatcaacacctcacatcctctttcgccgat
ttcctcgacagccccaatgctcttgacgcaacgcagatagcttcggacattgcgcaaatc
ggcaatttgcttgccgccaaacaacgtgttggaacacttccagttcaaagagggaaaata
ttattcctccactggaaagcatttttcgagcacggcctaattgaaaatagtaaagtgaag
cagttcgagggaattcgagaacagtgggagaaggttggggaaaaggcttttgctgggtgc
ttgaagtggggatacggtatgacctctcttcgacggaagcggaaacagagaattttcgat
catgaagttgatgggaaagctggggagaatggccccttgggtgtagtgtcttcttccccc
ccgcccacggatgtggatgttcagttaagcttctattggagggagatatag
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integrated database retrieval system
