Paludisphaera borealis: BSF38_00276
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Entry
BSF38_00276 CDS
T04622
Symbol
nth_1
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pbor
Paludisphaera borealis
Pathway
pbor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSF38_00276 (nth_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbor03400
]
BSF38_00276 (nth_1)
Enzymes [BR:
pbor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BSF38_00276 (nth_1)
DNA repair and recombination proteins [BR:
pbor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSF38_00276 (nth_1)
Prokaryotic type
BSF38_00276 (nth_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HflK_N
Motif
Other DBs
NCBI-ProteinID:
APW58868
UniProt:
A0A1U7CIY4
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All DBs
Position
346677..347375
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AA seq
232 aa
AA seq
DB search
MRTRTASAASGDDKEPLDVDEAFRRLREAVRGLPKAAMFDLRDRGFGTPFEQLVGSLISA
RTRDETTLDVCLKLFESARTPSEMKALGEARLVELIHKATFPEAKARDILALSKRIVEEC
GGRTPDTMEGLTTFRGVGPKIAALTLAVGFGKPTIAVDVHVHRVTNRWGYVATRTPEQTM
KALEAKLPERYWIEINERLVPFGKFVCTAAAPKCSTCLLLSMCRQVGVARRR
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcggacgcgaaccgcgagcgcggcgagcggcgacgacaaggagccgctggacgtcgac
gaggcgttccggcggctccgcgaggccgtgcgcggtttgcccaaggcggcgatgttcgac
ctccgcgaccgcgggttcggcaccccattcgagcagctcgtcggcagcttgatctcggcg
cggacccgcgacgagacgacgctcgacgtctgtctgaagctgttcgagtcggcccggacg
cccagcgaaatgaaggccctgggggaggcccggttggtcgaactgatccacaaggcgacc
tttcccgaggccaaggcgcgcgacatcctggcgttgtcgaagcggatcgtcgaggaatgc
ggcggccggacgcccgacacgatggaggggctgacgaccttccggggcgtggggccgaag
atcgccgccctgacgctcgcggtcggcttcggcaagccgacgatcgccgtcgacgtccac
gtccaccgcgtcacgaaccgctggggatacgtggccacgcgcacgcccgagcagacgatg
aaggcgctcgaggccaagctgccggagcgctactggatcgagatcaacgagcggctggtg
ccgttcggcaagttcgtctgcacggccgccgcgccgaagtgctcgacctgcctgctgctc
tcgatgtgccgccaggtcggggtcgcccgacggcggtga
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