Parvularcula bermudensis: PB2503_09699
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Entry
PB2503_09699 CDS
T01298
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr00300
Lysine biosynthesis
pbr00550
Peptidoglycan biosynthesis
pbr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PB2503_09699
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PB2503_09699
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbr01011
]
PB2503_09699
Enzymes [BR:
pbr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PB2503_09699
Peptidoglycan biosynthesis and degradation proteins [BR:
pbr01011
]
Precursor biosynthesis
Amino acid ligase
PB2503_09699
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF4082
Motif
Other DBs
NCBI-ProteinID:
ADM09992
UniProt:
E0TDS6
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All DBs
Position
1937129..1938571
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AA seq
480 aa
AA seq
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MRLSDLIPLDGHLDAEITGLTADSRQVKPGFLFAALPGETTDGRRYIDQAIAAGAAAILA
PTGTTATVPVLADDNPRQALAMLAARFHAGQPKCIVGVTGTNGKTSVARFVAQLWSAFGH
SAGTVGTLGASAPGYDYALRHTTPDPVELHQVISTMAAMGTTHLAMEVSSHGLAQHRADG
VRFSHAGFTNITQDHLDYHPSFEAYFAAKMRLLTALLPETGQAVITTDGAGAEGAIEAAQ
GAGRRVLTVGRRGETLKLLSCVPHQGGLALTVSVEEGPAQSVALSLIGDFQADNALVAAG
LVIASGAEPEAVIEAMAKLSAAPGRMQPAGQKSCEGGMASAFVDYAHTPDAIATALRAIK
PHVPGGRVVVVIGAGGDRDRTKRPLMGRAAAAGADLVIVTDDNPRSEDPAAIRSQVAEGA
PGAQIIGGREAAIRAGAEALKAGDVLLVTGKGHEQTQTIGHVTYPFDDVSTTLAAMGGEG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgtccgacctcatccccctcgacggccatctggatgcggagattaccggcctg
acggcggattcccgtcaggtgaagccaggctttctctttgcggccctgccgggggagacg
accgacggtcggcggtatatcgatcaggccattgcggccggggcggcggccatcttggcg
ccgacagggacgaccgcgacagtccccgtcctggccgacgacaatcctcgccaggcgctg
gctatgctggccgcccgttttcacgcgggccaaccaaagtgcattgtcggcgtgaccggt
acgaacgggaagacctccgtcgcgcggttcgttgcacagctttggtcggcttttggccat
tctgcgggcacggtcggcaccttgggggctagcgccccgggctatgattacgcgctgcgc
cacacgacccccgatcccgtggagctgcaccaggtgatctccaccatggcggcgatggga
acgacccatctggcgatggaagtgtcctcccacggtcttgcccaacatagggccgacggc
gtccgattttcccatgccggctttacgaatattacccaggaccatctcgattatcatcca
agctttgaggcctatttcgccgccaaaatgcgcctactgacggcccttcttcccgagacg
ggccaagcggtgatcaccaccgacggtgccggcgcagagggggcaatcgaggccgcgcag
ggggcgggcagacgggtgctgaccgttggacggcgcggcgagacgctcaagctcttatcg
tgtgtgccccatcaaggcggattggcattgacagtgtccgtcgaggagggccccgcccag
agtgtcgcgctttcattgatcggtgatttccaggcggacaatgctcttgtggcggcgggg
ttggtcatcgcgtcgggggcggagccggaggcggttatcgaggcgatggccaagctctcc
gccgcgccggggcgtatgcagcccgccgggcaaaaatcatgtgagggggggatggcatcg
gcctttgtcgattatgcccatacccccgatgccattgcgaccgccttgcgggccatcaaa
ccccatgtccccggcgggcgtgtggtggtggtgatcggggccggcggtgatcgcgaccgg
accaaacggcccttaatggggcgggcggcggcggcgggcgccgatctggtcattgtcacc
gacgacaatccgcgttctgaagacccagcggcgatcagatcccaggtcgccgagggcgcc
cccggggcgcagatcatcggcgggcgcgaagcggcgatcagagcgggggccgaggccttg
aaggcgggggacgttctcctggtgaccggcaagggccatgagcagacccagaccatcggc
cacgtgacctatcccttcgatgatgtgtcgacgacccttgcggccatgggaggtgaggga
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