Pectobacterium brasiliense: B5S52_03510
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Entry
B5S52_03510 CDS
T06364
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra00300
Lysine biosynthesis
pbra00550
Peptidoglycan biosynthesis
pbra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B5S52_03510
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
B5S52_03510
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbra01011
]
B5S52_03510
Enzymes [BR:
pbra01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
B5S52_03510
Peptidoglycan biosynthesis and degradation proteins [BR:
pbra01011
]
Precursor biosynthesis
Amino acid ligase
B5S52_03510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Tudor_FRX1
Motif
Other DBs
NCBI-ProteinID:
ARA75002
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Position
768979..770466
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AA seq
495 aa
AA seq
DB search
MADRNLRDLLAPWVQDTPARALREMTLDSRVAAAGDLFVAIVGHKADGRRYIPQAIAQGV
AAIVAEAEGEAADGTVREMHGVPVVYLSNLNQRLSALAGRFYQQPAEKLQLIGVTGTNGK
TTTTQLLAQWSQALGETSAVMGTVGNGLLGRAIPTENTTGSAVDVQQVLSQLVDQGATFA
AMEVSSHGLVQHRVAALPFAAAVFTNLSRDHLDYHGDMESYEAAKWALFSEHRVGQMIIN
ADDDVGLRWLAKLPDAVAVTMENNLVPGCRGRWLKATQIDYHDNGATIAFDSSWGHGEIE
SRLMGAFNVSNMLLALATLLSLGYPLDKLVIAGSQLQPVCGRMEVFHAEAKPTVVVDYAH
TPDALEKALEAARLHCQGKLWCVFGCGGDRDKGKRPLMGGIAEQLADRVVVTDDNPRSEE
PQAIVADILSGLLDAGRVQVIHGRAEAVTSAIMQAQENDVVLVAGKGHEDYQLVGNQRLD
YSDRITVARLLGVIA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatcgtaatttgcgcgatttacttgcgccgtgggtgcaagacactccggcgcgc
gcgctgcgggaaatgacattagacagccgcgttgcggctgccggggatctgtttgtcgcg
attgtcgggcacaaagcagatggacggcgctatattccgcaggcaattgcgcaaggcgta
gcagcgattgttgccgaagctgaaggtgaggccgctgatggcaccgttcgcgaaatgcac
ggtgtgccagtggtgtatctcagcaacctgaaccagcgactgtccgcgctggcaggccgt
ttttatcagcagcctgcggaaaagttacagctgattggcgtaacgggaaccaacggaaaa
acgacgacaactcagcttctggcgcagtggagtcaggcattaggcgaaacgagtgctgtg
atgggtaccgtaggcaatggcctattaggtcgagcaattccgacagagaatacgacaggg
tctgctgtcgatgttcagcaggtgctgagccaactggtcgatcaaggtgcgacgttcgcc
gccatggaagtgtcttcccacggtctggtgcagcatcgtgtggctgcgttgccgttcgcg
gcggcggtgttcactaacctgagccgcgatcatcttgattaccatggcgatatggaaagt
tacgaagcggccaaatgggcgctgttctccgagcatcgtgttgggcagatgattatcaac
gcggatgacgacgtcggactgcgctggttggcgaagctgccggatgcggttgccgtcact
atggaaaacaatcttgtccccggctgccgtgggcgctggctgaaagcgacacagattgat
tatcacgataacggtgccacgattgcgtttgattcaagctgggggcatggcgaaattgaa
agccgcctgatgggcgcgtttaacgtcagcaatatgctgctggcgctggcaacgctgctg
tctctgggctatccgctcgataaattggttatcgcgggttctcaactgcaaccggtatgt
ggccgcatggaagttttccatgctgaagcaaaaccaacggtcgttgtggattacgcccac
acgccagacgcgctggaaaaagcgcttgaagcggcacgcttgcactgtcaggggaaactt
tggtgtgtgtttggctgtggtggcgatcgtgataaaggtaagcgcccacttatgggcggt
atcgcagaacaactggccgatcgcgttgtggttaccgatgataacccgcgtagtgaagag
cctcaggcaattgttgccgatattctctctgggttgctggatgccgggcgcgttcaggtg
attcacggacgtgctgaagcggtcactagcgcgattatgcaggcgcaggaaaatgacgtg
gtgctggttgcgggtaaagggcacgaagactaccaactggtgggcaatcagcgtctcgat
tattccgatcgcatcaccgttgcccgcctgctgggggtgattgcatga
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