Pseudomonas brenneri: QDY63_14135
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Entry
QDY63_14135 CDS
T10502
Symbol
mdeB
Name
(GenBank) alpha-ketoglutarate dehydrogenase
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
pbre Pseudomonas brenneri
Pathway
pbre00010
Glycolysis / Gluconeogenesis
pbre00020
Citrate cycle (TCA cycle)
pbre00620
Pyruvate metabolism
pbre00785
Lipoic acid metabolism
pbre01100
Metabolic pathways
pbre01110
Biosynthesis of secondary metabolites
pbre01120
Microbial metabolism in diverse environments
pbre01200
Carbon metabolism
pbre01210
2-Oxocarboxylic acid metabolism
Module
pbre_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
QDY63_14135 (mdeB)
00020 Citrate cycle (TCA cycle)
QDY63_14135 (mdeB)
00620 Pyruvate metabolism
QDY63_14135 (mdeB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
QDY63_14135 (mdeB)
Enzymes [BR:
pbre01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
QDY63_14135 (mdeB)
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Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
WJM93955
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Position
2996522..2999200
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AA seq
892 aa
AA seq
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MNGFVKTVNHSAIDQQELTEWRDALQSLVRHAGPERAREILDMLADAGNTPAIGWKPRHG
TPYINSIDVDQQPHFPGDLATEERLASLVRWNALAMVVRANQAYGELGGHIASYASAADL
FEVGFNHFFRARHNNEGGDLVFYQPHSAPGIYARAFLEGRLSEQDLAHYRQELGAVKAGA
RGLSSYPHPWLMPDFWQFPTGSMGIGPISSIFQARFMRYLHHRGLQDTTDRHVWGVFGDG
EMDEPESMSALTLAAREGLDNLTWVVNCNLQRLDGPVRGNGRIIDELEALFAGAGWNVIK
LVWGSDWDALLAKDEDGALVRTLSQTVDGQFQTFAAKDGAYNREHFFGQSESLAKLAAGL
SDEQIDRLKRGGHDMLKIHAAYHAARRVKGRPTVILAQTKKGFGMGEAGQGKMTTHQQKK
LDREALIGFRNRFQLPLTDEQTESLSFYKPAADSLEMRYLHQRRAALGGYVPSRSQGAEP
VPVPPVSGYAGFATQAEGKEMSTTMAFVRMLSNLLKDKALGPRIVPIVADEARTFGMANL
FKQIGIYSSVGQRYEPEDIGSILSYREATDGQILEEGISEASAISSWVAAATSYSVHGLR
MLPFYIYYSMFGFQRVGDLIWAAADQRARGFLLGATAGRTTLGGEGLQHQDGSSHLMAAT
VPNCRAYDPAFAGEFAVILDHGMRQMLEHDVDEFYYVTLMNENYPQPSLPAGVEAAIIKG
MYRLDGSAGAKVRLLGSGTLVREAQAAAQLLADDWQVDSEVFSVTSFSELAREAREVERY
NRLHPLQAPQRSHLATCLPLGAPVVAVSDYVRAVPQMIGSYLGSSYTVLGTDGFGRSDTR
AALRDFFEVDRHHIVLAALAALVEKGSLEAQVCQQAIERYGLHTERAASWTH
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtttcgtaaagacagtcaatcactcagccattgaccagcaggagctcaccgag
tggcgcgacgccctgcaatccttggtgcgccatgcgggccctgagcgcgcgcgggagatc
ctcgatatgctggccgacgccggcaacaccccggccatcggctggaagccgcgccatggc
acgccgtacatcaacagtatcgacgtggatcagcagccacacttccccggcgacctggcc
actgaagagcgtctggcctcgttggtccgctggaatgccctggccatggtggtgcgggcc
aaccaggcctatggcgaactgggtggccatatcgccagctatgccagcgcggcggacctg
tttgaagtgggcttcaaccatttcttccgtgcgcgccacaacaatgagggcggcgacctg
gtgttctaccagccccattccgcgcccggcatctatgcgcgggcgtttcttgaaggccgc
ttgagcgagcaggacctggcccattaccgacaggaactgggcgccgtcaaggcgggtgcc
cgtggcctgtccagctacccgcacccgtggttgatgccggacttctggcagttccccacc
ggctccatgggcatcggcccgatcagctcgattttccaggcgcgctttatgcgttacctg
caccatcgtggcttgcaagacaccaccgaccgccacgtgtggggcgtgttcggcgatggc
gagatggacgagccggaaagcatgtcggccctgaccctggccgcccgcgaaggcctggac
aacctgacctgggtggtcaactgcaacctgcaacgcctcgatggcccggtgcgcggcaat
gggcggattatcgatgaattagaggcgctgtttgccggtgccggctggaacgtgatcaag
ctggtctggggttcggactgggacgccttgctggccaaggatgaagacggtgcgttggtg
cgcaccttgtcccagaccgtggacgggcagttccagacctttgctgccaaggacggtgcc
tataaccgtgagcacttcttcggccagagtgaatccctggccaagctggcggcgggcttg
agcgatgagcagatcgaccgcctcaagcgcggcggccacgacatgctgaaaatccatgcc
gcctaccacgccgcgcgccgggtcaaggggcgccctacggtgatcctggcccagaccaag
aaaggcttcggcatgggcgaggccgggcagggcaagatgaccacccaccagcagaaaaaa
ctcgaccgcgaggcgttgatcggttttcgtaaccgcttccagttgcccttgaccgacgag
cagaccgaatccctgagtttctacaaacctgccgccgacagcttggaaatgcgctacctg
caccagcgtcgcgccgccctcggcggctatgtgcccagccgcagccagggcgccgagccg
gtgcccgttccgcccgtgagtggctacgccggttttgccacccaggctgaaggcaaggaa
atgtccaccaccatggcctttgtgcggatgctcagcaacctgctcaaagacaaggccctg
ggcccgcggatcgtgccgattgtcgccgacgaagcgcgcacctttggcatggccaacctg
ttcaagcagatcggcatctactccagcgtcggccagcgctacgagccggaagatatcggc
tcgatcctcagctatcgcgaagcaaccgatgggcagatccttgaagaaggtatcagcgaa
gccagcgccatcagttcctgggtcgcggcggccaccagttactcggtacatggtttgcgc
atgctgccgttctacatctactactcgatgttcggctttcagcgcgtgggcgacctgatc
tgggccgccgccgaccagcgcgcccggggcttcttgctcggagccacggcgggccgtacc
accctgggcggtgaggggttacagcatcaagacggcagcagccacctgatggccgcgacc
gtgcccaactgccgcgcctacgacccggcgttcgccggcgaatttgcggtgattctcgac
cacggcatgcgccagatgcttgagcacgatgtggacgagttctactacgtgaccctgatg
aatgaaaactacccgcagccgagcctgccggcgggcgtcgaagcagcgattatcaagggc
atgtatcgcctcgacggcagtgccggcgccaaggtgcgcctgcttggctccggcacgctg
gtgcgcgaggcccaggctgccgcgcagttgctggccgacgattggcaggtcgacagcgag
gtgttcagcgtgaccagcttcagtgaactggcccgcgaggcgcgtgaggtggagcgctac
aatcgcctgcatccgctgcaagccccacagcgcagccacctggcaacctgcctgccgcta
ggcgcgccagtggtggcggtgtcggactatgtgcgcgcagtgccacagatgatcggttca
tacctggggtcgagctacaccgtgctggggaccgatggcttcgggcgcagcgacacccgt
gcggcgttacgcgacttttttgaggtggaccgtcaccacatcgtcctcgctgcgctggcg
gccttggtggagaagggcagcctggaggcgcaggtgtgccagcaggcgattgagcgctat
ggcctgcacaccgagcgggcggcgtcctggacccactga
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