Pseudomonas brenneri: QDY63_23120
Help
Entry
QDY63_23120 CDS
T10502
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pbre Pseudomonas brenneri
Pathway
pbre01501
beta-Lactam resistance
pbre01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QDY63_23120
01503 Cationic antimicrobial peptide (CAMP) resistance
QDY63_23120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbre03036
]
QDY63_23120
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbre02000
]
QDY63_23120
01504 Antimicrobial resistance genes [BR:
pbre01504
]
QDY63_23120
Chromosome and associated proteins [BR:
pbre03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
QDY63_23120
Transporters [BR:
pbre02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
QDY63_23120
Antimicrobial resistance genes [BR:
pbre01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QDY63_23120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
Beta-barrel_RND
HH_MFP_RND
BSH_CzcB
YknX_C
Biotin_lipoyl
RND-MFP_C
BSH_YknX
BSH_LcnD
BSH_CusB
HH_EMRA
CzcB_C
Beta-barrel_AprE
HH_CzcB
GspL_C
Motif
Other DBs
NCBI-ProteinID:
WJM90226
LinkDB
All DBs
Position
5010952..5012115
Genome browser
AA seq
387 aa
AA seq
DB search
MLRRRMLIMLAVVLLIVLLLGGYKAFSIYQQIQVFSAPKPPISVAVATAVEQPWQQRLPA
VGTLKALQGVNLALEIAGTVKAVQFESGQKVKAGQPLVQLDSAVEDALLQTAQADLGLAQ
LDYGRGSQLVGSQAISKGEFDRLSAQLQKNKATVNQLKASLAKKHIVAPFSGTIGIRQVD
VGDYLASGTVIATLQDLSSLYVDFYVPEQAVPRLAVGQAVQVQVSAYPKLTFPGTLSAIN
PKVESSTRNVLVRATLANPDNQLLPGMFSNLQVLLPDPQAQVVVPESAITYTLYGNSAYV
VAQKKAEDGSLEKGADGQPILIAERRFIETGERRDGLVLVSKGLSSGEQVVSAGQIKLDT
GAHIAITADKNLPAAPGQPPRNDGSRN
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtcgtcgcatgctgatcatgttggccgttgtgctgttgattgtcctgctgctg
gggggctataaggccttctccatttaccagcagatccaggtcttttccgcccccaaaccg
ccgatcagcgtggcggtggccacggcggtcgaacaaccctggcaacagcgcctgccggcg
gtgggcacgctcaaggccttgcaaggggtgaaccttgccctggagatcgccggcaccgtc
aaggccgtgcagttcgagtccgggcagaaggtcaaggccgggcaaccactggtgcaactg
gacagcgcggtggaagacgccctgctgcaaaccgcccaggccgacctgggcctggcccag
ctcgattacgggcgcggcagccaactggtgggcagccaggcaatctccaagggtgagttc
gaccgactctcggcgcaactgcaaaaaaacaaggccacggtcaaccagctcaaggcatcc
ctggccaagaaacacatcgtcgcaccgttcagcggcaccatcggcattcgccaggtcgac
gtgggcgactacctggccagcggcacggtgatcgccaccttgcaggacctgagcagcctc
tatgtggatttctatgtgcctgaacaagcggtgcccagactggccgtcggccaggcggta
caggtgcaagtctcggcctacccgaaactgaccttccccggcaccctcagcgccatcaac
cccaaagtcgagagcagcacccgtaacgtgctggtacgcgccaccctggccaaccctgac
aatcaactactaccgggtatgttcagcaacctgcaagtgctgttgcccgacccacaagcg
caggtggtggtgccggaaagtgcaattacctacaccctctacggcaactcagcctacgtg
gtcgcacagaaaaaggccgaggacggcagcctcgaaaaaggagccgatggccaaccgata
ttgatcgccgaacgacggtttatcgagaccggcgagcggcgcgacggcctggtgctggtc
agcaagggcctgagcagtggcgagcaagtggtgagtgccgggcagatcaagctcgacacc
ggtgcgcatatcgccatcaccgcggataaaaacctgccggccgccccgggccaacccccg
cgcaacgacggttcaaggaactga
DBGET
integrated database retrieval system
