Plasmodium brasilianum: 92372987
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Entry
92372987 CDS
T10352
Symbol
MKS88_004900
Name
(RefSeq) CCR4-associated factor 16
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
pbrs Plasmodium brasilianum
Pathway
pbrs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbrs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
92372987 (MKS88_004900)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbrs03019
]
92372987 (MKS88_004900)
Messenger RNA biogenesis [BR:
pbrs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
92372987 (MKS88_004900)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
NACHT
AAA_21
AAA_23
RsgA_GTPase
MeaB
Dynamin_N
AAA_29
Arf
Septin
DnaB_C
AAA_15
AAA_22
MMR_HSR1
ATP-synt_ab
AAA_18
AAA_14
AAA_24
AAA_28
Zeta_toxin
nSTAND3
DEAD
AAA_33
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
92372987
NCBI-ProteinID:
XP_067071280
LinkDB
All DBs
Position
13:1038157..1040121
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AA seq
268 aa
AA seq
DB search
MNDITIHNLNYNYYNRIKNTSTKALDNVNLSFGRGMRIVVCGKNGAGKSTLLSILAGKKL
IKEEQVLVFNRPVFHDTALTNRIGFVGEWWSDEYAMNITIKDFFSQYSSSKRYKILLKLF
DIDENKLISSISKGEKKKVQILVNLIKRKDIYIFDEATESLDLISRKLLLEFLKKECIKH
NCIIIYSTHIFDYMEKWCSHVLYLSNGSVTFFSDIHTIKNVKNYTSLAEYIFDNMMKEIK
ERDNIDNVDGSKEEGEYNSEMINIAYQG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatataacaatacataacttaaattataactactacaatcgaataaaaaacaca
agcacgaaagcacttgataatgtaaacttgtcatttggaagaggaatgagaatcgttgtt
tgcggaaaaaacggagctggaaaaagtaccttactgagtattttagccggaaaaaaactg
ataaaagaagagcaagttttagttttcaacagaccggtttttcacgacactgcgttaaca
aacagaataggattcgtgggagaatggtggagtgatgagtatgctatgaacatcacaata
aaagatttcttttcgcaatatagtagctctaaaagatataaaattttactgaaattattc
gacattgatgaaaataaattaatatctagtatctccaaaggagagaagaaaaaagttcaa
attttggtcaatctgattaagagaaaagacatttacatctttgatgaagcaactgaatca
ttagatttgatatcccggaaactattactagagtttttgaagaaggaatgtatcaaacac
aattgcattataatttattctacacatatctttgattatatggaaaaatggtgtagccat
gttttatacttgtccaacggatcagttacttttttttcagatatacacactattaagaat
gttaaaaattatacctcattggccgaatatatttttgataatatgatgaaggaaataaaa
gaaagggataatattgataacgtggacggatcgaaagaggagggagaatacaattctgaa
atgattaatatagcatatcaaggataa
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