Petaurus breviceps papuanus (sugar glider): 138152409
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Entry
138152409 CDS
T10505
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138152409 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbrv03041
]
138152409 (EFTUD2)
Spliceosome [BR:
pbrv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
138152409 (EFTUD2)
Complex C
U5 SnRNP specific factors
138152409 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
138152409
NCBI-ProteinID:
XP_068932249
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGREAKDLDEMDDDDDDDDMGDHDDDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFVLEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacacagacctttatgatgagtttgggaattatattggaccagagctagattccgat
gaagatgatgatgaattgggtagagaagccaaagatcttgatgagatggacgatgatgac
gatgatgatgacatgggagaccatgatgatgatcaccctgggatggaggtggtcttgcat
gaggacaaaaaatactacccaacagcagaggaggtctatgggcctgaggtggagacaatt
gttcaggaggaggacactcagcctctcacggagccaattattaaaccagtaaaaaccaag
aaattctctctgatggagcagacgttacctgtcactgtgtatgagatggatttcttggca
gacttgatggacaactcagagctgatcagaaatgtgaccctctgtggacatcttcaccat
ggcaaaacttgttttgtagattgtttaatagagcagactcacccggaaatcagaaagcgc
tatgatcaagatctctgctacacagacatcctattcactgagcaagagaggggtgttggc
atcaaaagtactccagtgacagtggtcctgccagataccaaggggaagtcgtacctcttc
aatatcatggacacaccaggacatgtgaatttttctgacgaggtaacagctggcttgcgc
atctctgatggagtagtacttttcatcgatgcagctgaaggggtgatgctgaatactgag
cggctgatcaagcacgcagtgcaggagaggctggccgtcactgtgtgcatcaacaagatt
gaccggctgattctagagctaaaacttcccccaacagatgcctattacaagctacgacac
attgtggatgaggtcaatggattaatcagcatgtattccaccgatgagaacctgatcctc
tctccacttctgggcaatgtgtgtttttccagctcccagtacagcatctgtttcacactg
ggctcctttgccaagatctatgctgacacctttggtgacatcaattaccaagaatttgcc
aagaggctatggggtgacatttacttcaatcctaaaacgcggaagtttaccaaaaaggcc
ccaaccagcagctcccagcggagctttgtggagtttgtcttagagccactttataagatc
ctagctcaggttgtgggagatgtggacaccagcctcccgaggaccctggatgaactgggc
atccacctgaccaaagaggagctgaagctgaacatacgccctctccttaggctggtctgc
aaaaagttttttggggagttcacaggctttgtagatatgtgtgtgcagcatataccttct
ccaaaagtgggtgccaagcccaagattgagcatacttacactggcggtgtagactcagac
cttggtgaggccatgagcgactgtgatcctgatggccctctgatgtgccacaccaccaag
atgtacagtactgatgatggggtacagttccatgcctttgggcgggtgctgagtggcacc
atccatgctgggcagccagtgaaggtgcttggggaaaactatacattggaagatgaagag
gattcccagatctgtaccgtgggccggctctggatttctgttgccaggtaccacatagaa
gtgaaccgagttcctgcaggcaactgggttttgattgaaggtgtggatcagcccattgtg
aaaactgccaccatcactgagccccggggcaatgaggaggctcagatcttccggccttta
aaattcaataccacttcagtcatcaagattgctgtggaaccagtcaacccctctgagcta
cctaagatgctggatggccttcgcaaagtcaacaagagctacccgtccctcaccaccaag
gtggaagaatctggggaacatgtgatcctgggcactggggagctctatctggactgcgtg
atgcatgacttacggaagatgtactcagagatagacatcaaggtggccgacccagttgtc
acattttgtgagacagtggtagaaacttcttccctcaagtgctttgctgagacacccaat
aagaagaacaagatcaccatgattgctgaacctcttgagaagggtctggctgaagatata
gaaaatgaagtggtacagatcacttggaataggaagaagctaggcgagtttttccagaca
aagtatgactgggatttgctggctgcccgttctatctgggcttttggccctgatgccact
ggccccaacatcctagtggacgacactttgccctcagaggtggataaagctctgctgggc
tcagtgaaggatagcattgtccaaggtttccagtggggcaccagggaagggcccttgtgt
gatgagctgattcgcaacgtgaaattcaagatcttggatgcagttgttgcccaggaacca
ctgcaccggggaggaggccagatcattcccactgccaggagggttgtctattctgccttc
cttatggctacccctcgtctaatggagccatactactttgtggaagttcaagcccctgca
gactgtgtctctgctgtctacactgtcttggccaggcgcagaggccatgtgacacaggat
gcacctatcccaggctctccactctataccatcaaggccttcatcccagctattgactca
tttggttttgaaactgacctccggacccacacccagggacaagccttctctctctctgtt
ttccaccactggcagattgtacctggtgacccgttggataaaagcattgtcatccgtccc
ctggagccacagccagcccctcacctggctcgagagttcatgatcaagactcgtcgtagg
aagggtctgagtgaggatgtgagcatcagcaagttcttcgatgatcctatgttgttggag
cttgccaagcaggatgtggttctcaactaccccatgtga
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