Petaurus breviceps papuanus (sugar glider): 138156321
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Entry
138156321 CDS
T10505
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
138156321 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbrv03000
]
138156321 (KDM2B)
04121 Ubiquitin system [BR:
pbrv04121
]
138156321 (KDM2B)
03036 Chromosome and associated proteins [BR:
pbrv03036
]
138156321 (KDM2B)
Enzymes [BR:
pbrv01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
138156321 (KDM2B)
Transcription factors [BR:
pbrv03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
138156321 (KDM2B)
Ubiquitin system [BR:
pbrv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
138156321 (KDM2B)
Chromosome and associated proteins [BR:
pbrv03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
138156321 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
138156321 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
Cupin_8
F-box
JmjC
JmjC_2
Motif
Other DBs
NCBI-GeneID:
138156321
NCBI-ProteinID:
XP_068937686
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MEAEKGSGRRLRSINRQGYDENEESSDVEEIVSVRGFSLEEKLRSHHYQGDFVRAMDGKD
FNFEYVQREALRVPLVFPNPDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNSQKGTEM
SMSQFVRYYEMPESQREKLYNVISLEFSHTKLENLVKRPNVIDLVDWVDNMWPQHLKEKQ
TESTNLIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGKKIFWLIPPTLHNL
GVYEEWVLSGKQSDVFLGDRVKQCQRIELAQGDTFFIPSGWIHAVYTPVDSLVFGGNILH
SFNVPMQLRIHEIEDRTRVQAKFRYPFYYEMCWYVLERYVHCVTQRSHLTQEYQRESMLI
DASRKPSVDGFSSDSWLEMDEESCELHPQEEEKEKKEKEEKEKEDKEKEKEGKKEKEEEK
EESVDKAPKPLAPLVPPLPPIPPVPPVLPFPPPHATASPTSTPSEGQEATMKKPKAAAMR
YLKRTLSNESDESVKSSMTTDYPKTPTGSPATEVSTKWTHLTEFELKGLKALVEKLESLP
ENKKCVPEGIEDPQALLEDMKNVLKEHADDDQSLAITGVPVVTWPKKTAKNRAVGRPKGK
LGPASAVKLAANRTTAGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIM
RQCIAPVLPHTAVCLVCGEAGKEDTVEAEEGKFNLMLMECSICNEIIHPGCLKVKESDGV
VNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLKEQKMNRDNKEGLDSAKRRG
ECEEAARRKSEEHTKKVPPDAILRRKSDEVHLRRKRKFEKPQELNTRKRLKLSKEEKLFR
KKRRSWKNAEDRAGLVNKPPRRFKQEPEEDLPEAPPKSKESDQSRSSSPTAGPSTESAEG
PDKKMKVRRKRRLPNKELSKELSKELNQEIQKTENSLANENHQPIKSEPESENEEPKRVL
GGGERPPRFSKGLNGAPREPRHPLMPSLRSPPRIPARPPPSLSPPKCIQMERHVIRPPPI
SPPPDSLPLDDGAAHVMQREVWMAVFSYLSHSDLCVCMRVCKTWNRWCCDKRLWTKIDLN
HCKSITPLMLSGIIRRQPVTLDLSWTNISKKQLSWLINRLPGLRDLLLSGCSWIAVSALC
SSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQIDNRSKLRNIVELRLAGLDITDA
SLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLSF
FKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagaaaggctctggacgaagattgcgttcgatcaaccgtcagggttatgac
gagaacgaggagtcgtcggacgtggaggagattgtgagcgtcaggggtttcagcctggag
gagaaattacgcagccaccactaccagggggacttcgtgcgcgccatggacgggaaagat
ttcaactttgagtacgtacagagagaagccctcagagtgcctctggtcttcccaaatccc
gatggactaggaattaagatgcctgaccctgactttactgtccgagatgtcaaactccta
gtggggagtcggcgactggtggatgtgatggacgtcaacagtcagaagggcacggagatg
agcatgtcccagtttgtgcgctactatgagatgcctgaaagccagcgggagaaattatac
aatgtcatcagcctggagttcagccacacgaagctggagaacctggtcaagcggcccaat
gtgatcgacttggtggactgggtagacaacatgtggccccagcacctgaaagagaagcag
acggagtctaccaatctcattgcagagatgaagtaccccaaggttaagaaatactgtctg
atgagcgtcaaaggctgtttcacggatttccatatcgattttggaggtacatctgtctgg
taccacgtcttccggggcaagaagatcttctggctgatcccccccaccttgcacaatttg
ggagtgtatgaagagtgggtactctctggaaagcagagcgacgtcttcctgggagatcga
gtcaagcagtgccaaagaatcgagctggcccagggcgacacgttttttatcccctctggc
tggatccatgctgtctacacgcccgtagactccctggtgtttggtggaaatatcctacat
agttttaatgtgcccatgcagcttcgcatccatgagatagaggacaggacgcgggtacag
gccaaattccggtaccctttctactatgagatgtgttggtatgttttggagagatacgta
cattgcgtgacccagcgttcccacctcactcaggagtaccagcgagaatcaatgctcatt
gatgcctcgagaaaacccagtgtagacggcttctcatctgattcctggctggagatggat
gaggaatcctgtgagctgcacccccaggaggaggaaaaggaaaagaaagagaaggaggag
aaagagaaagaagacaaggagaaggagaaggaagggaagaaggaaaaggaggaagagaag
gaagagagcgtggacaaggcacccaagcctttggctccactggtcccacctctcccaccc
atcccgcctgtcccacctgttctgcccttcccgcccccccatgccaccgcctctcctacc
agcacaccctcggagggccaggaggccactatgaaaaagcccaaagcagccgccatgcgg
tacctcaaaaggactttgtccaatgaatcagatgagagcgtcaagtcctccatgaccaca
gactatcccaaaaccccgacaggctcccccgccacagaagtctccaccaagtggactcac
ctcacggagtttgaactgaaaggcctgaaagccctggttgagaagcttgaatcccttcca
gagaacaagaagtgtgtccccgagggtattgaggatccccaagcgcttctggaggacatg
aagaatgtcctgaaggaacatgctgatgatgatcaaagcctggcaatcactggtgtgcct
gtggtcacgtggcccaagaagacagcaaagaaccgggcggtaggtcggcccaaggggaag
ctgggcccagcctcagcagtgaagttggccgccaatcggacgacagcaggggcgcgccgg
cgacggacgagatgccgcaaatgcgaggcctgcttgcggaccgagtgcggcgagtgtcac
ttctgcaaggacatgaagaagtttggggggcccgggcggatgaagcagtcctgcatcatg
agacagtgcattgcacctgtgctgccccacactgctgtgtgtctggtgtgtggagaggca
ggaaaggaagacacggtggaggcggaggagggcaagtttaacctcatgcttatggagtgc
tccatttgcaatgaaatcatccaccctggatgccttaaggtgaaggagtcggacggtgtg
gtcaacgatgagcttcccaactgctgggagtgtccaaagtgcaatcatgctggcaagact
gggaaacaaaagcgcggccccgggttcaagtacgcctcgaacctgcctggctcactgctg
aaggagcagaagatgaaccgggacaacaaggaggggctggactcagccaagcggagagga
gagtgcgaggaggctgcccggcgcaagtcagaagagcacaccaagaaggtgccccccgac
gccatccttcgcaggaagtctgatgaagttcacttgaggaggaagcggaaattcgagaaa
ccccaggagttaaacactcggaagcggctaaaactcagcaaggaggagaagcttttcagg
aaaaagcggcggtcctggaagaatgctgaggaccgcgcaggactggtcaacaagccccct
cggcgtttcaagcaggaacccgaggaagacctacctgaggcgccccccaagagcaaggag
agcgaccagtccaggtccagttccccgactgcgggacccagcaccgagagcgccgagggc
ccagacaagaaaatgaaggtccgccggaaacgacggctccccaacaaggagctgagcaag
gagctgagcaaggagctgaaccaggagatccagaagaccgagaacagcctggccaacgag
aaccaccagcccatcaagtcagagccggagagtgagaacgaggagcccaagcgcgtgctg
ggagggggagagcggcccccccgcttcagcaagggcctcaacggggccccccgtgagccg
cggcatccgctcatgcccagcctgcgcagccccccccgtattccggcgcggcccccgccg
tccctgtccccacccaagtgcatccagatggagcggcacgtcatccgcccgccgcccatc
agccccccgccagactcgctgcccctggatgacggcgccgctcacgtcatgcagcgggaa
gtgtggatggccgtgttcagctacctcagccacagtgacctctgtgtctgcatgcgggtc
tgcaagacctggaaccgctggtgctgtgataagcggttatggaccaaaattgacctgaac
cactgcaaatccatcaccccgctgatgctcagcggcatcatccgccgacagcccgtcacc
ctggacctcagctggaccaacatctccaagaagcagctcagctggctcatcaacagactg
cctgggctccgtgacctgctgctgtctggctgctcctggattgccgtgtctgccctgtgc
agctccagctgtcctctgctgcggacgctagacgtgcagtgggtggaaggactcaaggat
gcccagatgcgggacctcttgtctccccccacagacaaccggccaggccagatagacaac
agaagtaagcttcggaacatcgtggagctgcgcctcgctgggctggacatcacagatgct
tctctgcggctcatcatccgtcacatgcccctcctctccaaactacacctcagttactgt
aaccacgtcactgaccagtccatcaacctgctgacagccgtaggaaccaccaccagggat
tccttaacagaaattaacttatcagactgcaataaggttactgaccagtgcctgtcattc
tttaaacgttgtggaaatatctgtcatattgacctaaggtactgtaaacaggtgaccaag
gaaggctgtgagcagttcatagctgaaatgtcagtgagtgtccagtttgggcaagtggaa
gaaaaactcctacagaaactgagttag
DBGET
integrated database retrieval system
