Paraburkholderia bryophila: NDK50_00615
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Entry
NDK50_00615 CDS
T08797
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry01501
beta-Lactam resistance
pbry01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NDK50_00615
01503 Cationic antimicrobial peptide (CAMP) resistance
NDK50_00615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbry03036
]
NDK50_00615
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbry02000
]
NDK50_00615
01504 Antimicrobial resistance genes [BR:
pbry01504
]
NDK50_00615
Chromosome and associated proteins [BR:
pbry03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NDK50_00615
Transporters [BR:
pbry02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NDK50_00615
Antimicrobial resistance genes [BR:
pbry01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NDK50_00615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
BSH_CzcB
Collagen
HH_MFP_RND
BSH_CusB
BSH_YhbJ
RND-MFP_C
Beta-barrel_RND
SPESP1
Motif
Other DBs
NCBI-ProteinID:
WCM20020
LinkDB
All DBs
Position
1:complement(135438..136880)
Genome browser
AA seq
480 aa
AA seq
DB search
MEADRPDGSGTSQAPSKTKRMRLITVAAAVVVIVLAAQGIWSRHDAHAALERDADHASQT
SVEVVRPQKSTAGLDLVLPGNVQAFLDTPIYARTNGYLKKWYADIGAHVKSGQLLAEIDT
PEVDDQLRAARADLANADANYALAKSTADRWTDMLKSKSVSKQETDEKVGDMLAKKGTLD
AARFNVARLEKTQSFQKVYAPFDGIVTARNVDVGALIDAGSSGGPAKELFHVAQADRLRV
YVNVPQAYAQQVRAQQTAFLTLTETPSKHYPGTVARTAGAVDPQQRTMLVEVDVDNRNGD
LLPGAYAQVHFALGTGAAPFTLPGNAFLFRPDGVKVATVDAQHKVKLIAVSLGTDFGTRV
AVASGLQGNEQVILNPQDSIVDGAPVRIVPRQGAAGASGASGASGASGASGASGASGAAG
AAGASGASGAAGAAGAAGASGAAGAAANGEGTADTSGASGAAANAPGAGPVASPSASASS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagatcgtccggacggttccggcacctcgcaagcaccgtcgaaaaccaaacgc
atgcgattgattaccgtggcggcggccgtggtggtgatcgtcctcgccgcgcaaggcatc
tggtcgcgccacgatgcacacgcggcgctcgaacgcgatgccgaccacgcgagccagacc
agcgtggaagtcgtgcggccgcagaagtcgacggccgggctcgatctcgtgctgccgggc
aatgtgcaggcctttctcgatacgccgatctacgcgcgcaccaacggctatctgaagaag
tggtacgcggacatcggcgctcacgtgaaaagcggccagttgctcgccgaaatcgacacg
ccggaagtggacgatcaactgcgcgccgcgcgcgccgacctcgcgaatgccgacgccaac
tacgcgctcgcgaaaagcaccgccgaccgctggaccgacatgctcaaaagcaagtcggta
tcgaagcaggaaaccgacgagaaagtcggcgacatgctcgcgaagaaaggcacgctggat
gcagcgcgcttcaacgttgcgcgtctggagaagacgcagtcgttccagaaggtctatgcg
ccgttcgacggcatcgtcaccgcgcgtaacgtggatgtgggcgcactgatcgatgcgggc
agttcgggcggaccggccaaggaactgttccatgttgcgcaggccgaccgcttgcgggtg
tatgtgaacgtgccgcaggcttacgcgcaacaggtgcgcgcgcaacaaaccgcgtttctg
acgctgaccgagacgccgtcgaaacactatccggggacggtggcgcgcaccgcgggcgcg
gtcgatccgcaacagcgcaccatgctggtcgaagtggacgtcgacaatcgcaacggcgat
ctgctgcccggcgcgtatgcgcaggtgcacttcgcgttgggtacgggcgcggcgccgttt
acgctgccgggcaatgcgtttctgttccgcccggatggcgtgaaagtcgcgaccgtggac
gcgcagcacaaggtgaagctgatcgcggtgtcgctggggaccgacttcgggacgcgtgtg
gcggtcgcgtcgggtttgcaaggcaacgagcaggtgattctgaatccgcaggattcgatc
gtggacggggcgccggtgcggatcgtgccgcgccagggggcggcgggtgcttcgggtgct
tcgggtgcttcgggtgcttcgggtgcttcgggtgcttcgggtgcttcgggtgctgcgggt
gctgcgggtgcttcgggtgcttcgggtgctgcgggtgctgcgggtgctgcgggtgcttcg
ggtgctgcgggcgctgcggcgaacggtgaaggcacggccgacacgtccggcgcttccggt
gctgccgctaacgcaccgggtgctggcccggtcgcgagtccatccgcgagcgcatcgtca
tga
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