Paraburkholderia bryophila: NDK50_03790
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Entry
NDK50_03790 CDS
T08797
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry01501
beta-Lactam resistance
pbry01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NDK50_03790
01503 Cationic antimicrobial peptide (CAMP) resistance
NDK50_03790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbry02000
]
NDK50_03790
01504 Antimicrobial resistance genes [BR:
pbry01504
]
NDK50_03790
Transporters [BR:
pbry02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NDK50_03790
Antimicrobial resistance genes [BR:
pbry01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NDK50_03790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WCM20605
LinkDB
All DBs
Position
1:complement(850360..853551)
Genome browser
AA seq
1063 aa
AA seq
DB search
MWFTRISIGNPVLATMMMMALLVIGLFSYQRLKVDQFPDITFPIVVVQTAYPGASPESVE
SDVTRKIEEAVNTISGIDEITSRSYDAQSVVIVQFDLSVDAVQAAQDVRDKIALIRPDLR
DGVKDPRVLRYDPADTPIVTVAVSNAPGATLSTRDLTTVADQIVRKRLETVRGVGSVSLV
GGVKRQVQIDVKPEKLQALSIGVDQVIRAVQNENQEIPAGPLTSSHIEQTVQIKGRFDKP
DDFKRIIIARRGAQSAIPTASSATQPVTLDQVADVVDGQQEPDSTALLNGQRALFVSIIK
AQGENTVDVAHGVRDEVARLQPLLPPGVKLDVTDDSSIEIEDSVNEVKRTLLEGALLTVL
IVFLFLGSWRSTVITGLTLPIALIGTFAVMYACGFTINVITLMALSLCVGLLIDDAIVVR
ENIVRHVQLGADHRTAALDGTKEIALAVLATTFSIVAVFLPVGFMGGIIGRFFHQFGITV
AAAVLISMFVSFTLDPMLSSIWPDPDLHDADTGRKGYRYGRLIQRSLHLFDTQIDRLTAF
YQRLLGWSLKHRAITLVIAAVTFFGSLFLVPFVGTEFVPNADFSETQIGLNMPVGTSLEA
TSAKVKQVQAILATYPEVRFTYATVNSGNTQGKNTALITVRLKDRRDRTRGVVELNEAFR
ARLASVAGVAVTEIGMSDGAGSTKAIQLSLQGDNIDELRRLSDVAQARMAKIPGLVDLDS
SLKADKPIVAINVKRELASDLGVGVADIGTALRPLLSGDAISTWRAPDDQDYDVSVRLPR
EQRQDVDDLARLMIATNRTDANGAPVLVPLRQIADIVKTTGPDVLNRRDLQREVELSANV
NGRSPGEVAADVAKTLDAMHLPAGYHYRFEGSTKSMNESFIYAVEALALAVIFIYMILAS
QFASFAQPLAIMASLPLTLIGVLVALLLFGSTLNMFSIIGFVMLMGLVTKNAILLVDFAN
QARRGTLLDASGKGRKMERREALLEAARVRLRPILMTTLAMIFGMLPLAAALGEGGEQRG
PLGQTVIGGVITSSILTLVVVPVVYTVLEDWGSWLRIKIWKKG
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcacccgcatcagcatcggcaacccggtgctcgccacgatgatgatgatggcg
ctgctcgtcatcggtctgttctcttatcagcggctgaaagtcgatcagtttcccgacatc
acgtttccgatcgtggtcgtgcagaccgcgtatccgggcgcgtcgccggaatcggtcgag
tccgacgtcacgcgcaagatcgaggaagcggtcaacacgatcagcggcatcgacgaaatc
acgtcgcgctcctacgacgcgcaatcggtcgtgatcgtgcaattcgatctgtcggtcgac
gcggtacaggccgcgcaagacgtgcgcgacaagatcgcgctgatccgcccggacctgcgc
gacggtgtgaaggacccgcgcgtgttgcgctacgacccggcggacacgccgatcgtcacg
gtcgcggtgtcgaacgcgccgggcgccaccctgtccacgcgcgacctcaccaccgtcgcc
gatcagatcgtgcgcaagcgcctcgaaaccgtacgcggggtcggctcggtgtcgctggtg
ggcggcgtcaaacgccaggtgcagatcgacgtgaagccggaaaaactgcaggcgctgtcg
atcggcgtcgatcaggtgatccgcgcggtgcagaacgagaatcaggaaattccggccggc
ccgcttacgtcgagccatatcgaacagaccgtgcagatcaaaggccgtttcgataaaccg
gacgacttcaagcgcatcatcatcgcccgacgtggcgcgcagtccgcgattcccacggca
agctcggcgacgcaaccggtcacgctcgatcaggtcgccgacgtggtggacggccagcag
gaaccggacagcaccgcgctattgaacggccagcgtgcgttgttcgtgtcgatcatcaag
gcgcagggcgaaaacacggtcgacgtggcgcacggcgtgcgtgacgaagtcgcgcgtctg
cagccgctgctgccgcccggtgtgaagctcgatgtcaccgacgactcgtcgatcgaaatc
gaagacagtgtcaacgaagtcaaacgcaccctgctcgaaggtgcattgctcaccgtgctg
atcgtgttcctgttcctcggctcgtggcgcagcaccgtgatcaccggtctcacgctaccc
atcgcgctaatcggcacgttcgcggtgatgtacgcgtgcggcttcacgatcaacgtgatc
acgttgatggcgctgtcgctgtgcgtcggcctgctgatcgacgacgcgatcgtggtgcgc
gagaacatcgtgcggcacgtgcagctcggcgcggaccatcgcaccgccgcgctcgacggc
accaaggaaatcgcgctggcggtgctggccaccaccttctcgatcgtcgcggtgtttttg
ccggtcggcttcatgggcggcatcatcggccgcttctttcaccagttcggcattacggtc
gcggccgccgtgctgatctcgatgttcgtgtcgttcacgctcgatccgatgctgtcgtcg
atctggccggaccccgatctgcacgacgccgacacgggccgcaagggctaccgttacggc
cgtttgatccagcgttcgctgcatctgttcgacacgcagatcgaccggctcacggcgttt
tatcagcggctgctcgggtggtcgctgaagcatcgcgcgatcacgctggtcatcgcggcg
gtgacgtttttcggcagcctgtttctggtgccgttcgtcggcaccgagttcgtgccgaac
gcggatttctccgaaacgcagatcggcttgaatatgccggtggggacgtcgctcgaagcg
acctcggcgaaagtcaaacaggtgcaggcgattctcgcgacctaccccgaagtgcgtttc
acgtatgcaacggtcaactcgggcaatacgcagggcaagaacaccgcgctcattaccgtg
cgcctgaaagaccggcgcgatcgcacgcgcggcgtggtcgaactgaacgaggcgtttcgc
gcgaggctggcgtcggtggcgggcgtggccgtgaccgaaatcggcatgtcggacggcgcg
ggcagcaccaaggcgattcagttgagcttgcagggcgacaacatcgacgaactacgtcgc
ctgtccgacgtggctcaagcgcgcatggcgaagatcccgggcctcgtcgatctggattcg
agcctgaaggcggacaagcccatcgtcgcgatcaacgtgaagcgcgaactggcctccgac
ctcggcgtaggcgtcgcggatatcggcacggcgctgcgccccctgctgtccggcgacgcg
atcagcacctggcgcgcccccgacgaccaggactacgacgtcagcgtgcggctgccgcgc
gagcagcgccaggacgtggacgatctcgcccggctgatgatcgccaccaatcgcaccgac
gcgaacggcgcgccggtgctggtgccgctgcggcagatcgcggacatcgtcaagacgacc
ggccccgacgtgctgaaccggcgcgacctgcaacgcgaggtggagttgtcggcgaacgtg
aacggccgctcgcctggcgaggtcgccgccgacgtcgcgaaaacgctcgacgcgatgcat
ctgccggcgggctatcactaccgcttcgaaggctcgaccaaaagcatgaacgagtcgttc
atttacgcggtggaggcgttggcgctggcggtgattttcatctacatgattctggcgtcg
cagttcgcgagcttcgcgcaaccgctcgcgatcatggcttctctgccgctgacgctgatc
ggcgtgctggtcgcactgttgctgttcggcagcacgttgaacatgttctcgatcatcggc
ttcgtgatgctgatggggctcgtgacgaagaacgccattctcctggtggactttgcgaat
caggcgcggcgcggcacgctgctggacgcgtccgggaagggccgcaagatggagcggcgc
gaggccttgctcgaagcagcgcgggtgcggctgcgaccgattctgatgaccacgctggca
atgatcttcggcatgctgccgctggcggcggcgctgggcgaaggcggcgagcagcgcggg
ccgttgggacagacggtgattggcggggtgatcacgtcatcgattctcacgttggtggta
gtgccggtggtttatacggtgctggaggattgggggagttggctgcgaataaagatatgg
aaaaagggctag
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