Paraburkholderia bryophila: NDK50_04815
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Entry
NDK50_04815 CDS
T08797
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NDK50_04815 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_04815 (nth)
Enzymes [BR:
pbry01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NDK50_04815 (nth)
DNA repair and recombination proteins [BR:
pbry03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NDK50_04815 (nth)
Prokaryotic type
NDK50_04815 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WCM20795
LinkDB
All DBs
Position
1:complement(1086385..1087029)
Genome browser
AA seq
214 aa
AA seq
DB search
MNANKRRAIYETLQSLNPHPTTELEYTSPFELLIAVLLSAQATDVSVNKAMRKMFPVANT
PQQVFDLGEEGVTGYIKTIGLYRTKAKNVIATCRILLDQYGGEVPEDREALESLPGVGRK
TANVILNTAFGHPTIAVDTHIFRVANRTGLAPGKDVRTVEAALEKFTPAEFRQDAHHWLI
LHGRYVCKARKPECWHCVIEPLCEFRPKTPPPDL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgaacaaacgccgcgccatctacgaaacgcttcagagtctcaacccgcatccg
accaccgagctcgagtacacctcgccgttcgaactgctgattgccgtgctgctgtccgcg
caggcaaccgacgtgtcggtcaacaaggcgatgcgcaagatgtttccggtcgcgaacacg
ccgcagcaggtgttcgatctcggcgaggaaggcgtgaccgggtatatcaagaccatcggc
ctgtaccggaccaaggcaaagaacgtcatcgcgacctgccggattctgctcgaccagtac
ggcggcgaagtgcccgaagatcgcgaggcgctcgaaagcctgccgggtgtcggccgcaag
accgctaacgtcattctgaataccgcgttcggtcatccgaccatcgccgtggacacgcac
atctttcgggttgccaatcgaaccggtctggcgcccggcaaagacgtgcgcacggtcgaa
gcggcgctggagaaattcacgcccgccgagttcaggcaggacgcgcaccactggctgatc
ctgcacggccgttacgtgtgcaaggcgcgcaagccggaatgctggcattgcgtgatcgaa
ccgctctgcgagttccggccgaagacaccgccgccggatctatga
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