Paraburkholderia bryophila: NDK50_06110
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Entry
NDK50_06110 CDS
T08797
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry01501
beta-Lactam resistance
pbry01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NDK50_06110
01503 Cationic antimicrobial peptide (CAMP) resistance
NDK50_06110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbry03036
]
NDK50_06110
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbry02000
]
NDK50_06110
01504 Antimicrobial resistance genes [BR:
pbry01504
]
NDK50_06110
Chromosome and associated proteins [BR:
pbry03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NDK50_06110
Transporters [BR:
pbry02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NDK50_06110
Antimicrobial resistance genes [BR:
pbry01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NDK50_06110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
WCM21033
LinkDB
All DBs
Position
1:complement(1383218..1384420)
Genome browser
AA seq
400 aa
AA seq
DB search
MSTEIEINSPKRLRHLRLVGIVALLVAAGIVASGIASRVHAKQELATWSAQQAVPTVVAY
TPKHDADAQALVLPGRLSAFVNAPIYARVSGYLHAWYADIGTHVKAGQLLGVIDTPDLDQ
QLQQARADLQNSMANEKLAASTAHRWTEMLKQDSVSQQDADEKTSDLVAKQATVAAAQAN
VGRLEALESFKRITAPFDGVVTARTTDIGALINAGGGNGPELFSVSDARQLRVYVSVPQD
EAAAIQPGMSATLTVPERPGVRFNAKLVDTDDAITPSSGTLLVQLSVDNKDGLLIPGEYT
EVHFDLPTNAHALSIPASSLIFRQSGLQVAVVGNDNRAVLKPVSIATDLGTHVEIASGLN
ASDRVIDNPPDSLVSGDEVRLQGTPGTALAERRAAESTHG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgagatcgagatcaattcgcccaaacggctgcgtcatctgcggctcgtcggc
atcgtcgcgctgctggtcgcggcgggcatcgtggcgagcggtatcgcgagccgcgtccac
gcaaagcaggaactggccacctggtccgcgcagcaggccgtgccgacggtggttgcctac
acacccaaacacgacgccgacgcgcaggcgctggtgctgccgggacgcctgtccgccttc
gtcaacgcgccgatctatgcgcgcgtgtccggctatctgcacgcgtggtatgcggatatc
ggcacgcatgtcaaagccggccaattgctcggcgtgatcgacaccccggacctcgatcag
caattgcagcaggcccgcgccgatctgcagaattcgatggccaatgaaaaactcgcggcg
tccaccgcccaccgctggacggagatgctgaaacaggactcggtttcgcaacaggacgcc
gacgagaaaaccagcgacctcgtcgcgaagcaggccaccgtcgccgcggctcaggcgaat
gtgggccgcctcgaagcgctcgaatcgttcaaacgcattaccgcgccgttcgacggcgtc
gtcaccgcgcgcacgaccgatatcggcgcgctgatcaacgccggcggcggcaatgggccg
gagttgttctcggtgtcggacgcgcgccagttgcgggtctatgtcagcgtgccgcaggac
gaagcggccgcgatccagcccggcatgagcgccacgctcaccgtgccggaacgcccgggc
gtcaggttcaacgcgaaactggtcgataccgacgacgcgatcacgccgtcctccggtacg
ttgctggtgcaactatcggtcgacaacaaggacggcctgctgatccccggcgagtacacc
gaggtgcatttcgatttgccgaccaacgcccacgccttgtcgattcccgcgagttcgctg
attttccggcaaagcggcctgcaggtcgccgtggtcggcaacgacaaccgcgcggtactg
aaacccgtctcgatcgcgaccgatctcggcacccatgtggagatcgcgtcgggtctgaac
gcgagcgaccgcgtgatcgacaacccgcccgactcgctcgtctcgggcgatgaggtgcga
ttgcaaggcacgccgggcacggcactggcggagcgccgcgcggcggagagcactcatgga
taa
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