Paraburkholderia bryophila: NDK50_17375
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Entry
NDK50_17375 CDS
T08797
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry01501
beta-Lactam resistance
pbry01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NDK50_17375
01503 Cationic antimicrobial peptide (CAMP) resistance
NDK50_17375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbry03036
]
NDK50_17375
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbry02000
]
NDK50_17375
01504 Antimicrobial resistance genes [BR:
pbry01504
]
NDK50_17375
Chromosome and associated proteins [BR:
pbry03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NDK50_17375
Transporters [BR:
pbry02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NDK50_17375
Antimicrobial resistance genes [BR:
pbry01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NDK50_17375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
WxLIP_HBD
Motif
Other DBs
NCBI-ProteinID:
WCM19177
LinkDB
All DBs
Position
1:complement(3869232..3870464)
Genome browser
AA seq
410 aa
AA seq
DB search
MRVERVPFRLISAATAAVLLAACGPKQSAPPQQTPEVGIITVQPTSVPVVTELPGRTSAF
LVAQVRARVDGIVLRREFTEGGEVKAGQRLYKIDPAPYIATLNNAKATLAKAQANLVSTT
AQANRYKVLVAANAVSKQDYDNAVASEGQAAADVAAGKAAVDTAQINLGYTDVTSPVTGQ
IGVSQVTPGAYVQASAATLLATVQQLDPVYVDLTQSSLDGLKLRREVQEGRLKTSGPDAA
KVSLILEDGRTYSEKGKLQFTDVTVDQSTGSVTVRALFKNADKVLLPGMFVRARIEEGVN
DNALVVPQVGITHDQKGQPTALVVGDDNKVALRQLVTSGTYGSNWVVESGLKAGDRVIVA
GTEKARPGQQVKPVAAQLPATPASDASAQGAPAASGAAQTAQPASAASGA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgaacgggttccattccgcttaatcagtgccgcgacggctgccgtattgctg
gcagcgtgcggaccaaaacaatctgccccgccgcagcaaacgcccgaagtgggcatcatc
accgttcaaccgacttcggtacccgtggtcaccgaactgcccggccgcaccagcgccttc
ctcgtcgcgcaagtgcgcgcacgggtcgacggcatcgtgctgcgccgcgagttcacggaa
ggcggcgaagtcaaggcgggtcagcgtctgtacaagatcgatccggcgccgtacatcgct
acgttgaacaacgcgaaggccacgctggccaaggcgcaagccaacctcgtgtcgaccacc
gcgcaggctaaccgctacaaggtgctggtggccgcgaacgcggtcagcaagcaggactac
gacaacgcggtcgcctcggaaggccaggccgcggcagacgtcgccgcgggcaaggcagcg
gtcgacacggcgcagatcaatctcggctatacggacgtgacttcgccggtcaccggccag
atcggcgtgtcgcaagtcacgccgggcgcgtatgtgcaggcaagcgccgccacgctgctg
gcgaccgtccagcaactcgatccggtctatgtggacctgacgcaatcgagcctcgacggt
ctgaagctgcgtcgcgaagtgcaagagggccgtctgaagacgagcggtcctgacgccgcc
aaggtctcgctgattctcgaagacggccgtacctattcggaaaagggcaagctgcagttc
accgacgtcacggtcgaccagagcaccggctcggtcacggtgcgcgcgctcttcaagaac
gcggacaaggtcttgttgccgggcatgttcgtgcgcgcgcggatcgaagaaggcgtcaac
gacaacgcgctggtggtgccgcaagtcggtatcacgcatgaccagaagggtcagccgacc
gcgctggtcgtcggcgacgacaacaaggtcgcgttgcgtcagctcgtcacgtcgggcacg
tacggttcgaactgggtggtcgagagtggcctgaaggccggggaccgcgtgatcgtcgcg
ggcaccgagaaggcgcgtccgggtcagcaggtcaagccggttgccgcgcaacttcccgcc
acacccgcttccgacgcatccgctcagggtgcgccggccgccagcggtgctgcacagacg
gcgcaacccgcctctgcggcatcgggcgcgtaa
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