Paraburkholderia bryophila: NDK50_18580
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Entry
NDK50_18580 CDS
T08797
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry00300
Lysine biosynthesis
pbry00550
Peptidoglycan biosynthesis
pbry01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NDK50_18580
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NDK50_18580
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbry01011
]
NDK50_18580
Enzymes [BR:
pbry01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
NDK50_18580
Peptidoglycan biosynthesis and degradation proteins [BR:
pbry01011
]
Precursor biosynthesis
Amino acid ligase
NDK50_18580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WCM19404
LinkDB
All DBs
Position
1:complement(4134169..4135716)
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AA seq
515 aa
AA seq
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MSALRKHHPAHRQIADALTWLHARVQPDAHLHADTRSLAAGDAFFAYAVDGADNRPFIDA
ALERGAAAVLVQPEGFAAQVDPSTTLAVPALNDLAGSIASGWYGDPSDAMLAVGITGTNG
KTSCSQWVSAALTALGKRCAIIGTLGTGLPGQLVHTGFTTPDAPQLQRSLAQLRDAGAQA
VAMEVSSHALHQGRVNGTAFDIAVFTNLTQDHLDYHGTFAAYEAAKARLFAWPALRAAVI
NRDDAAGRRLLASTQGHARTIAYGLDAALQDAPQADALLLASNVRATATGTAFHLSTSDW
GDADVEVQTLGAFNVSNLLGVLGALLAADVPFDAALTELAKLEPVNGRMQRLGGRLQNDE
PLVVIDYAHTPDALEKTLDALRPMAAARGGELICMFGCGGDRDATKRPLMGAIAERLADG
VIVTSDNPRSEDPQAILEQIAAGMQDASKARRIEDRASAILQAIRTAAREDVIVLAGKGH
EATQEIMGKKRAFSDQDHARLALAARATHARGGGE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcattgcgcaagcaccaccccgcccaccggcagatcgccgacgcgctcacctgg
ctgcacgcacgcgtgcagccagacgcgcatctgcatgccgacacgcgctcgctcgcagcg
ggcgacgcatttttcgcctacgcggtagacggcgcggacaaccgcccttttatcgacgct
gcgctcgaacgcggcgccgccgcggtgctggtgcagcccgagggatttgccgcgcaggtc
gatccgtccaccacgctggccgtgccggcgttgaatgatctcgctggctcgattgcgagc
ggctggtacggcgacccgagcgacgccatgctggcggtcggcattaccgggaccaacggc
aagacctcgtgcagccagtgggtgtcggcggcgctgaccgcgctcggcaagcgctgcgcg
atcatcggcacgctcggcacgggcttgccgggccaactcgtgcacaccggtttcacgacc
cccgacgcgccgcaattgcaacgcagcctcgcgcagttgcgcgacgcgggcgcgcaggcg
gtggcgatggaagtgtcgtcgcacgcgctgcatcaggggcgcgtgaacggcacggcgttc
gacatcgccgtgttcacgaacctcacgcaagaccatctcgactatcacggcaccttcgcg
gcgtatgaagcggcgaaggcgcgtctgttcgcctggccggcgttgcgcgcggccgtgatc
aatcgcgacgatgccgccggccgccgcttgctggccagcacgcaaggtcacgcccgcacg
atcgcctacggtctcgacgccgcgctgcaggacgcgccgcaagccgacgcgctgctgctg
gcgtcgaacgtgcgcgccacggccaccggcaccgcgttccatctaagcacctccgactgg
ggcgatgccgacgtcgaagtgcaaacgctcggcgcgttcaacgtgagcaatctgctcggc
gtgctcggcgcgctgctcgccgccgacgtgccgttcgacgcggcactcaccgaactggcg
aagctcgaaccggtgaacggccgtatgcagcgcctgggcggccgcttgcagaacgacgag
ccgctggtggtgatcgattacgcccacacgccggacgccctggaaaaaacgctcgacgcg
ctgcgccccatggcggccgcgcgcggtggcgaattgatctgcatgttcggctgcggcggc
gaccgcgacgcgaccaagcgtccgttaatgggcgcgatcgccgaacggctcgccgacggc
gtaatcgtgaccagcgacaacccgcgcagtgaagatccgcaagcgatcctcgaacagatc
gcagcgggcatgcaggacgcgtcgaaggcgcgccgcatcgaagaccgcgcgagcgcgatc
ctgcaagcgatccgcacggctgcgcgcgaagacgtcatcgtgctggccggcaaggggcac
gaagcaacacaggaaatcatgggtaagaaacgcgcgttctccgatcaggatcacgcccgc
cttgcgcttgccgcgcgcgcgacgcatgcccgtggaggtggcgaatga
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