Rubinisphaera brasiliensis: Plabr_3540
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Entry
Plabr_3540 CDS
T01431
Name
(GenBank) Isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
pbs
Rubinisphaera brasiliensis
Pathway
pbs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Plabr_3540
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pbs01007
]
Plabr_3540
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbs03016
]
Plabr_3540
Enzymes [BR:
pbs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
Plabr_3540
Amino acid related enzymes [BR:
pbs01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Plabr_3540
Transfer RNA biogenesis [BR:
pbs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Plabr_3540
Prokaryotic type
Other AARSs
Plabr_3540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ADY61137
UniProt:
F0SP34
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All DBs
Position
4357437..4361048
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AA seq
1203 aa
AA seq
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MFQKVTESDFISGEHAVLSLWQKRDVFGQLRNKNAGKPKWSFLDGPITANNPMGVHHAWG
RTYKDAYQRYFAMTGHELRYQNGFDCQGLWVEVEVEKELGLGTKTAIHEYGIDKFVNACK
RRVLKFAARQTEQSVRLGYWMEWDKPEELRKLAESVGSDGTIEYTTAREQQVSDTPHQIV
ARLGNPEWGGSYFTFSTENNETIWTFLKKCFKREKVYRGHDVMPWSGRGGSAYSQMEIAD
GRKLTTHRSLFVRFPLIERENEYLLIWTTTPWTLTSNVAAAVNPDLDYVKIKTKRDGSVY
YFAKDNLNFKRLEREFKEGFGRPEWSWPEGVPKLKTLAQMFKEQGGFEEEGTVKGSEMVG
WKYSGPFDELPAQQQPGGYPVEEHLTEKTGVSCHQVIDGGRDSKGSPHVVAGEGTGIVHI
APGCGDIDHKIGRELGLVGIAPLGEDGRFQDGFGEFTGREAIDPATVDLVLEKLKENHRL
VAVEEYPHIYPHCWRTGDELVFRLVDEWFIDMDWREEIKDVTKSIEWLPESIDGQNREVE
WLTNMRDWMISKKRFWGLALPIWVNPDDPTDFDVIGSLAELKERAVEGWNDFDGNTPHRP
WIDGVKIKSEKTGAILNRIEDVGNPWLDAGITPFSTMGYNHNRDTWNEWFPADFVTECFP
GQFRNWFYSLLALATMMRHDETDDPMLKRPFKTLLGHRLVMNEEGQPMHKSDGTAIWFEE
AAEQLGVDTLRWLYLGQNPASDLRFGTRHPDDHVTLSTPEGPISETKEGMPTCKVTSKPA
DEIRRQFLIPLWNSYAFFVNYARLDEFDPQAAKVPCGERPEIDRWILSRLQSLIQTAHEA
FPAFDVANFVNSAGDFIDDLSNWYIRRNRRRFWRSKDTNDSDKLAAYQTLYETLVTLTQL
LAPVIPFLAERMYQNLVFGQDLLQSEEAGSESGDSPASVHLCDYPTVNEELLDPVLNHRT
AIAQRIVKLGHQVREQSNLRVRQPLAEIRVACSGEEDRAAVDQFADVIADELNIKQIVSV
DNLDGIVQYSFKPNLKTLGPKYGKLLGALRQQIPALPAETLAPLRVGKAVSLEVNGETIE
LEPNDVLVSTEQSSEWGTSDEAGVQVAISTQLTDELRQEGMARDFVRQIQQARKDADFEI
EDRITIQYYASDADVQTAVTTWSDYICNETLATELKSVGAAADEMQSATVGDQELNFSVI
RSN
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaaagtgaccgagtccgacttcatttccggagaacatgccgtgctgtccctg
tggcagaagcgggatgtgttcgggcagctccgcaacaagaatgcgggtaagccgaagtgg
agctttctggacggcccaattaccgccaataacccgatgggggtccaccacgcctggggc
cggacttataaagacgcctaccagcgctatttcgccatgaccgggcacgaactgcgttac
cagaacgggttcgactgccagggtttgtgggtcgaagtggaagtggagaaagagctgggt
ctgggcaccaaaacagccatccacgagtacggcatcgataaattcgtcaatgcctgtaaa
cgccgcgtgctcaaatttgccgctcgccagactgaacagtctgttcgtctcggttactgg
atggaatgggacaagccggaagaactgcggaagctagccgagtcggtcggttcagacgga
accattgaatacaccaccgctcgcgagcagcaggtttccgacacgccgcaccaaattgtc
gcgcggctgggaaacccggaatggggtggatcgtatttcacgttctcgaccgagaacaac
gagaccatctggacgttcctgaagaagtgcttcaaacgggaaaaagtctatcgcggccac
gatgtcatgccgtggtccggtcgcgggggaagcgcctactcccaaatggaaatcgccgac
ggacgtaaactaacgacacaccgctcgttgtttgttcgtttcccgctcatcgaacgcgaa
aacgaatatctgctgatctggacaaccacgccgtggacgctaaccagtaacgtggcagct
gcagttaatcccgacctggattacgtcaaaatcaaaacgaagcgcgacggctccgtttat
tatttcgccaaagacaacctcaacttcaaacgtctggaacgtgaattcaaggaaggattc
ggccgcccggaatggagctggccagaaggtgtgccgaagctgaaaaccctcgcccagatg
ttcaaggaacagggtggctttgaggaagaaggaaccgtcaaaggctctgaaatggtcggc
tggaagtattccggcccgttcgacgaacttcccgcgcaacagcagcccggcggatacccg
gtcgaagaacatctgaccgagaaaaccggcgtgagttgccatcaagtcatcgacggtgga
cgcgactcaaaaggcagcccgcatgtggtggccggcgaaggtaccggcatcgtacacatt
gccccgggttgtggtgatatcgaccacaaaatcggccgggagctgggactcgtcgggatt
gctccactcggagaagacggacgtttccaggatggcttcggcgaattcaccggccgggaa
gcaatcgatcccgccacagtggacctggtcctcgaaaagctgaaagagaatcatcggctc
gttgcggtcgaagaatatccgcacatctacccgcactgctggcgaaccggcgatgaactg
gttttccgtctggtcgacgaatggttcatcgacatggactggcgggaagaaatcaaagac
gtgacgaagtcgatcgaatggcttcctgaaagcatcgatggccagaatcgcgaggtcgaa
tggttgaccaacatgcgtgactggatgatctccaagaaacgcttctggggccttgcgctt
ccgatctgggtcaacccggatgaccccactgatttcgatgtgatcggctctttggcagag
ctgaaagaacgggccgttgaaggctggaatgatttcgacggcaacacgccgcaccgtccc
tggatcgatggcgtgaagatcaagtcggagaaaaccggcgcgattctgaatcgtatcgaa
gacgtcggcaatccgtggctggatgcaggcatcaccccgttctccacgatgggctacaac
cacaaccgcgacacgtggaacgaatggttccctgctgatttcgtgaccgaatgttttccc
ggccagttccgcaactggttctactcgctgctcgcgctggcgacgatgatgcgtcacgac
gagacagacgatccgatgctgaagcggccgttcaaaacgctgctcggccatcgtctggtg
atgaacgaagaaggccagccgatgcacaaatcggacggcacggcgatctggtttgaagaa
gcagccgaacagctgggcgtggatacccttcgttggttgtacctcggacaaaacccggcc
agcgatttgcgattcggtacccggcacccggatgatcacgtgacgctgagcacgccggaa
ggtccgatttctgaaaccaaagagggcatgccgacttgcaaggtgacgagtaagccggcc
gacgaaattcgtcggcagttcctcattccgctttggaactcgtacgcgttcttcgtgaac
tacgcacgcctcgatgaatttgatccgcaggcagccaaggtgccttgcggcgagcgtccc
gagattgatcgctggattctttcccgtctgcaatcgctgattcaaacggctcacgaagca
ttccccgcattcgatgtcgccaactttgtgaatagcgcaggcgatttcatcgacgatttg
tcgaactggtacatccgccgtaatcgccgccgtttctggcgaagcaaggatacgaacgac
agcgacaaacttgctgcttaccagacgctgtacgaaacgctggttacattgacgcaactg
ctggccccggtgattccgttcctggccgagcggatgtatcagaacctggtcttcggtcag
gatttgctgcagtccgaagaagccggctctgaaagcggcgactcaccagcgtcggtccac
ttatgcgactacccgacggtgaacgaggagcttctcgatccggtactgaatcatcggacc
gcaattgcgcagcgaattgtgaaactgggccaccaggtgcgtgaacaatccaacttgcgt
gtgcgtcagccgctggcggaaattcgcgtcgcctgcagcggcgaagaggatcgggcagct
gtcgatcagttcgctgacgtcatcgccgacgaattaaacatcaaacagattgtctccgtg
gacaatcttgacggcatcgtccagtactcgttcaagccgaatctgaaaaccctgggcccg
aagtacggcaaattgctcggtgctctgcgtcagcaaattccagctctgcccgccgaaacg
ctggcaccgttgcgagtcggtaaagcagtgagtctggaagtgaatggcgagacgattgaa
ctcgagccaaatgacgttctggtcagcacagagcaatcaagcgaatggggtacgagcgac
gaagcgggtgtccaggtcgctatttccacccagctgactgatgagttgcgccaggaaggc
atggcacgcgactttgtgcgtcaaattcagcaagcacgcaaagatgctgatttcgaaatc
gaagatcgaatcaccattcagtattacgccagcgatgcagacgtacagactgcggttacc
acctggagtgactacatttgcaatgagacgctggcaaccgagctaaaatcggtcggggcg
gctgcagatgagatgcaatcagcaacggttggcgaccaggagttgaacttctccgtcatc
cgcagcaattga
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