KEGG   Pseudomonas bubulae: V6B39_05470
Entry
V6B39_05470       CDS       T10711                                 
Symbol
dgcA
Name
(GenBank) dimethylglycine demethylation protein DgcA
  KO
K21833  N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3]
Organism
pbub  Pseudomonas bubulae
Pathway
pbub00260  Glycine, serine and threonine metabolism
pbub01100  Metabolic pathways
Module
pbub_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:pbub00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    V6B39_05470 (dgcA)
Enzymes [BR:pbub01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.7  With an iron-sulfur protein as acceptor
    1.5.7.3  N,N-dimethylglycine/sarcosine dehydrogenase (ferredoxin)
     V6B39_05470 (dgcA)
SSDB
Motif
Pfam: Oxidored_FMN Pyr_redox_2 NAD_binding_8 FAD_oxidored Pyr_redox HI0933_like FAD_binding_2 DAO Thi4 GIDA AlaDh_PNT_C FAD_binding_3 Pyr_redox_3 Amino_oxidase 3HCDH_N FMO-like NAD_binding_7 NAD_binding_9 XdhC_C DUF2375
Other DBs
NCBI-ProteinID: WWR38883
UniProt: A0ABZ2H7K5
LinkDB
Position
1235728..1237788
AA seq 686 aa
MAFEAMFEPIQIGKLTIRNRVLSTAHAEVYATDGGMTTERYVQYYEEKAKGGIGLAICGG
SSVVAIDSPQEWWSSVNLSTDRIIPHFQNLADAMHKHGAKIMIQITHMGRRSRWDGFNWP
TLMSPSGVREPVHRATCKTIEPEEIWRIIGNYASAAGRAKAGGLDGVELSAVHQHMIDQF
WSPRVNKRTDEWGGSFENRMRFGLEVLKAVRAEVGPDFCVGIRLCGDEFHPDGLSHEDMK
QIAKYYDDTGMLDFIGVVGSGCDTHNTLANVIPNMSFPPEPFLHLAAGIKEVVKAPVLHA
QNIKDPNQATRILEGGYVDMVGMTRAHIADPHLIAKIKMGQVDQIKQCVGANYCIDRQYQ
GLDVLCIQNAATSREYMGVPHIIEKSTGAKRKVVIVGAGPAGMEAARVAAERGHDVTLFE
KKDAIGGQITTASKAPQRDQMAGITRWFQLELARLKVDLRLGTAADAATIMDLRPDIVVL
AVGGHPFVEQNEHWGAAEGLVVSSWDVLDGKVAPGKNVLVYDTICEFTGMSVADFAADKG
AQVEIVTDDTKPGVAIGGTSFPTYYRSLYPKEVVMTGDMMLEKVYREGDKVIAVLENEYT
GVKEERVVDQVIIENGVRPDEELYYGLKPDSRNKGQIDVEALFAIKPQPCLSEAGDGYLL
FRIGDCVAQRNVHAAIYDALRLCKDF
NT seq 2061 nt   +upstreamnt  +downstreamnt
atggcgttcgaagcaatgtttgagccgattcaaatcggcaagctgaccatccgcaaccgt
gtgctgagcaccgcccatgccgaggtgtatgccaccgatggcggcatgaccaccgagcgt
tatgtgcagtactacgaagaaaaggccaagggcggtatcggcctggcgatttgcggcggc
tcttcggtggtggccatcgacagtccgcaagagtggtggagttcggtcaacctgagcacc
gaccgcattatcccgcacttccagaacctggccgatgccatgcacaagcatggcgccaag
atcatgatccagattacccacatgggccgccgctcgcgctgggacggcttcaactggccg
accctgatgtcaccttccggtgtacgtgagccggtgcaccgggccacatgcaaaaccatc
gagcctgaagaaatctggcggatcatcggtaactacgccagtgccgcaggccgggccaaa
gccggtggactggacggggttgagctgtcggcggtgcaccagcacatgatcgaccagttc
tggagcccgcgtgtcaacaaacgcaccgatgaatggggcggcagttttgaaaatcgcatg
cgtttcggcctcgaagtgctcaaggccgtgcgcgctgaagtcggcccggatttctgcgtg
ggcatccgcctgtgcggggatgagtttcaccctgatggcctgagccatgaggacatgaaa
caaatcgccaagtactacgacgacaccggcatgctcgactttatcggcgtggtcggctcg
ggatgtgacacccacaacaccctggccaacgtaatccccaacatgagctttccgccggag
ccgtttttgcacctggccgccgggatcaaggaagtggtcaaggccccggtgctgcatgcg
cagaacatcaaggacccgaaccaggccacgcggattctggaggggggttatgtcgacatg
gtgggcatgacccgtgcccatatcgccgatccgcacctgatcgccaagatcaagatgggc
caggtcgaccagattaaacaatgcgtgggtgccaactactgcattgaccgtcagtaccag
gggctggacgtgctgtgcatccagaacgcggccacctcccgggaatatatgggcgtgccg
catatcatcgaaaaatccaccggggccaaacgcaaggtggtgattgtcggcgccgggcca
gcagggatggaggcggcacgggtagctgccgagcgcggtcatgacgtgaccctgttcgag
aaaaaggacgccatcggcgggcagatcaccaccgcctccaaagcgccccagcgtgaccag
atggcaggcatcactcgctggtttcaactggaactggcgcgcctgaaagttgacctgcgc
ctgggcaccgcagcggatgcggcgacgatcatggacttgcgtccggacattgtggtgctg
gcggtgggcgggcacccgtttgtggagcagaacgaacactggggcgcggccgaagggctg
gtggtcagcagctgggatgtactcgacggcaaagtggcgcccggtaaaaacgtgctggtg
tacgacaccatttgcgaatttaccggtatgtcggtggccgattttgcggcggacaaggga
gcgcaggtcgagatcgtgaccgacgacaccaagcccggtgtggccattggcggcacgtca
ttccccacgtattaccgcagcctgtatcccaaggaagtggtcatgaccggcgacatgatg
ctggagaaggtctaccgcgagggtgacaaggtgattgctgtgctggagaacgaatacacc
ggtgtcaaagaggagcgggtggtcgatcaggtaatcatcgaaaacggtgtgcgaccggat
gaagagctgtattacgggctcaagccggattcgcgcaacaagggccagatcgacgtcgaa
gcgctgttcgcgatcaagccgcaaccgtgcttgagcgaggcgggggacggctacctgctg
tttcgtatcggtgactgtgtggcccagcgcaacgtgcatgcagcgatctatgacgcgctg
cggttgtgcaaggatttttga

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