Pseudomonas bubulae: V6B39_08375
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Entry
V6B39_08375 CDS
T10711
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00300
Lysine biosynthesis
pbub00550
Peptidoglycan biosynthesis
pbub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V6B39_08375
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6B39_08375
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbub01011
]
V6B39_08375
Enzymes [BR:
pbub01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
V6B39_08375
Peptidoglycan biosynthesis and degradation proteins [BR:
pbub01011
]
Precursor biosynthesis
Amino acid ligase
V6B39_08375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WWR39423
UniProt:
A0ABZ2H955
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All DBs
Position
1853774..1855237
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AA seq
487 aa
AA seq
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MSLSLNKIFPHAGHDLLIRELTLDSRNVRAGDLFLAVPGGKLDGREHIADALKRGAAAVA
YEVDGADVLPISAVPLIPVKGLAAQLSDIAGRFYGEPSRHLNLVGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGTGFYGALQSGRHTTPDPIAVQAMLADLKKAGAKAVAMEVSSHG
LDQGRVSALAFDVAVLTNLSRDHLDYHGTMEAYAAAKAKLFAWPDLRCRVLNLDDEFGRQ
LAAEKHESRLISYSLEDTGATLYCRDAIFDDDGVRATVVTAQGEHLLRSSLLGRFNLSNV
LAAVGALLGLDYPLDEILKVLPKLEGPVGRMQRLGGGNKPLVVVDYAHTPDALEKVLLAL
RPHAKGQLLCLFGCGGDRDRGKRPLMAQVVERLADGVLVTDDNPRTEAPGQIFDDIREGF
VAPQDVTFVAGRGDAIAQLIAGASAADVIVLAGKGHEDYQEINGERHDFSDLVEAEKALN
TWEAAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgagcctgaacaagatttttcctcacgccggtcacgatctgctgatccgtgaa
ctgaccctcgacagccgcaatgtacgcgcaggtgatctgttccttgcggtgcctggcggc
aagctcgatggtcgtgaacatatcgctgacgcccttaagcgcggcgctgctgccgtggcc
tatgaagtggacggcgctgatgtgctgcctatctctgccgtgccgctgattccggtcaag
ggccttgcggcccagctgtcggatatcgccgggcgtttttatggtgagcccagccggcat
ctgaatctggtaggtgtcactggcaccaacggcaaaaccagcgtcactcagctggtggcc
caggcgcttgacctgctgggtcagcactgcggcatcgtcggcaccttgggcaccggtttt
tatggcgcgctgcaaagtggccgtcacaccacgccagacccgattgccgtacaggccatg
ctcgccgacctgaaaaaggccggggccaaagcggtagcgatggaggtttcttcccatggc
ctggatcagggtcgcgtcagtgcgttggcatttgacgtcgccgtgctgaccaacctgtcc
cgcgaccatctggattaccacggcacgatggaggcttacgccgccgccaaggccaagttg
tttgcctggccggacctgcgctgccgggtgctgaacctggacgatgaatttggccgccaa
ctggccgctgaaaagcatgagtcgcgcctgatcagctatagccttgaggacacaggggcc
accctgtactgccgtgatgccatctttgatgatgacggtgtgcgggccaccgtagtgacg
gcacaaggcgagcatctgttgcgcagctcgctgctgggacgcttcaacctgagcaacgta
ctggctgccgttggcgccttgcttgggctggactacccgctggacgaaattctcaaagtg
ctgcccaagctggaaggcccggtcggtcgcatgcagcgtttgggtggcggcaacaagccg
ctggtggtggtcgactacgcccacaccccggatgcactggaaaaagtactgctagccctg
cgcccgcatgccaagggccaactgctgtgcctgttcggctgcggcggcgaccgtgaccgc
ggcaagcgcccgttgatggcgcaagtggttgaacgtttggctgacggtgttctggtgact
gacgacaacccgcgcaccgaagcaccggggcaaatttttgatgatattcgtgagggtttt
gtcgcgccgcaggacgtcacttttgtcgccggtcgcggtgatgccattgcgcagttgatc
gccggtgccagcgccgctgacgtaatcgtgctggcgggtaaaggtcatgaggactatcag
gaaatcaacggcgaacgccatgacttctctgatctggtcgaagccgaaaaagccttgaac
acttgggaggctgcccatgcttaa
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